Detailed information of BRAKERKYLP00000001141.1 in Mastigias papua

Genomic Location: chr1:4686498...4688871
NR annotation: XP_015204927.1, PREDICTED: leucine--tRNA ligase, cytoplasmic-like, partial [Lepisosteus oculatus]
Species Mastigias papua · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BMJ2Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2
Q5R614Leucine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=LARS1 PE=2 SV=1
Q09996Leucine--tRNA ligase OS=Caenorhabditis elegans OX=6239 GN=lars-1 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002117 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133
all species →		tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002300
all species →		DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR004493
all species →		FamilyLeucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolicInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45794
all species →		LEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004823
all species →		Molecular Functionleucine-tRNA ligase activityInterproscan
GO:0006429
all species →		Biological Processleucyl-tRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000001141.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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