Gene detail

Detailed information of BRAKERKYLP00000001511.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047126643.1, plexin A3 isoform X2 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000001511

ATGGTGCAGCGTTCAGGAACAGAGTACTTATCAAGTGGTGCCTTTCGAGAAATAGTAATATTTGGCTCAAATTTTCAGAGTCAGCTCAGTTATACGTGTCATGTGGAGATTGAGGGAGGAATATTTGGAACGCCTGCCACACGTGAAAGCGATAAGATACTAAAATGCTCTTCATCGAATTACACTTATAATGCAAGACAACGTAGTTACTCTGCTCTTGTTACTGTGAAGTACGGTGGCGCAGTTCTGGACCAATCCAAGGAGATCAGAGTAAAATTCTATAAATGCGACGTCACACGGGATACTTGTGGTGTATGCCTTGATGCTCCAGAGCAGTGGAATTGTGGTTGGTGTGACAAAAAGTCGTGCACTGTTTCAGATGTCTGTGCGGCTGGTAAGCAATGGGCCAACAGCGCATGCCCATCACCACCTGTCATACAAAGGTTGACGCCATCTTCAGGAGCTATATATGGTAATATGGTTCTTGAAATAGCAGGACGAGATCTCGGAACAATGAGCaaagatattgaaaatgtaACAGTTGCTGGACAAGACTGTCAAATCCTATCAGAACTCTACGTAACATCAAAGATcGTTTATTGTAAAACGGGTAGTGTTAGCAAGCCAAGAAATGGTACCGTGAAGATGTTTGTTAAATTTGGCGACAGCATGGTTAATGTCGACTCGAAAACGCTTGTGTTTATGTACAAGAAGCCCATCATATCACGATTTGAGCCAACAAAGGGGCCATGTTCTGGTGGAACTAAATTGACAATATTTGGTAGTGACCTTAATGTTGGGAAGAATATCACCGTTGCAGTAGCTGGAAATGAGTGCAGCTTGAAGTCAAGATCTGCCAATCGCATCGCATGCACTATTTTGAGTAGATGTCCATCTCGCCGCCGAAGAGCTGCTAGCTCTGACACTGTTGTTATATCTTTTGACGGCCAATCAGTGCAACCTTCGACACCCACTGTATTTAGTGTTCAGCCGGACCCTATCGTTTCCAGCGTGAATACTTACAGGCTGAGGACACCAGATTCGCAGAAACTGGAAACGTTTGTGAGTGGTGGCCAAGTGTTCATTGTTAGAGGTGAAAGATTTGATCTTATCCAAAATCCGGTCATGTCCTTCACGGTATTCCCTGAAAAGGCCGTCAGATATGGATTATGCTCCTTGGTTAGCCCAGAGCAGCTGGATTGTGTTGCTCCAAATGTCACCGGTATTACTGGATATGTCAATGACACCGAAGTCAATGTGGAACTTGGGTTCGTCATGCAGCTGGTGACGTCAGTTAAAGTAGTAAGGAATATCTCTGTGAAAGGTGATCCTGTTTTCTACAAGTTTGACGGCATCATCAATCTCCAGCAAAATAATTTGTATTTGAAGGGAAGAAATCTTGATCTTCTTGGCAATGAAGATGTGAACGTGAGTGTTGCTGGGTTGGTATGTGTTGTGCAGAATATTCGTGAGGTTACAGTTGGAAAAGGCGGACTAGAGTACACGCTTGGGTATGTTCGCTACGTGAAGAGCAGCAAAGAGAAATCATTTCCATGGCTTTATGTGTATATCATTGCAGCGATCGGCGCCGTGTTTATTATCGTCATCCTTATACTTGGCATTTTGTACCGACGAAGGCAGATGAAGGAGAAGAAATATCAGAAAGTTAACCAAACTAGATTAGAGAATTTGGAGTCTATGTATGCAAGGGAATGTAAAGAAGCGTTTGCAGAGTTACAGATAGAAATGACAGATTTGACAACAGACATGTCAACAGCGTCAATGCCTTATTTGAAATTCGAGACTTACGCCATGAGACTGTTGTTTCCTAGTTATGGAAAACATCCAATTATGGAGAAAGATAGCAACAAAAGCGACTCCTGGAAGAGATACATGTCTTCATTGTGTGAACTATTAAAAGAGAAGGATTTTCTGTTGATATTTATTAAAACTCTGGAATCGCAACAGAGCTTTGCATTGCGTGACAGgTGCAAGTTTGCTTCATTACTGATTGTCGCTTTGCAAGATGACATGAAATACGTAACAGATATCCTTCAAGAACTCTTGGCTGATCTTATTCAAAGATACGTCGAATCGGAAAAACCGAAACTTCTTTTGCGAAGGACCGAATCTGTTGCAGAAAAATTGCTTACAAATTGGCTTTCGTACACATTGCACGAGTTCCTTCAAAATAGAGTGGGTGAGCCTCTCTTCAGGCTTTTTAATGCCATAGTTACGCTCCTTGATAAAGAACCAGTGGATGAGATAGCCTGTGAAGCTCGTAACTCTCTCAGTGAAGACAGGCTTTTACGACAGAAAGTGGACTTTAAGACAATAACTGCACACGTTGAATATGAGGGAAGTGATATGATCCAAGTTCAATTGTTGGATTGTGATTCAATCGATCAGGCTAAGGAGAAAATACTGAAATCTATTTACAAGAACGTAGCATTTTCTCAGATACCGAGTAAAGATTCACTCGTGCTAgTTTATCAAACACCAACTGGTGGTGAGAAGATCTTACATCAAGAGGACAGCACATGCGAAATCGATGGAGAATGGAAGAGGATCAATACTCTTGAGCATTTCCTTATTCCAGACGGATGTCAATTGAAATTGATGCCATTTTCAGTGTATTCAGATGGCACTGGCACACCTGGTAGGTTGGCTGGTAAGCCGATGacgtcattcattcattga

Transcript

BRAKERKYLT00000001511

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HCM2	Plexin-A4 OS=Homo sapiens OX=9606 GN=PLXNA4 PE=1 SV=4
Q80UG2	Plexin-A4 OS=Mus musculus OX=10090 GN=Plxna4 PE=1 SV=3
B0S5N4	Plexin A3 OS=Danio rerio OX=7955 GN=plxna3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001614 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18020 all species →	TIG_2	TIG domain found in plexin	Domain	Interproscan
PF20170 all species →	Plexin_RBD	Plexin cytoplasmic RhoGTPase-binding domain	Domain	Interproscan
PF01833 all species →	TIG	IPT/TIG domain	Domain	Interproscan
PF08337 all species →	Plexin_cytopl	Plexin cytoplasmic RasGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR041362 all species →	Domain	Plexin, TIG domain 2	Interproscan
IPR046800 all species →	Domain	Plexin, cytoplasmic RhoGTPase-binding domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR002909 all species →	Domain	IPT domain	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR013548 all species →	Domain	Plexin, cytoplasmic RasGAP domain	Interproscan
IPR031148 all species →	Family	Plexin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22625 all species →	PLEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0017154 all species →	Molecular Function	semaphorin receptor activity	Interproscan
GO:0002116 all species →	Cellular Component	semaphorin receptor complex	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030334 all species →	Biological Process	regulation of cell migration	Interproscan
GO:0071526 all species →	Biological Process	semaphorin-plexin signaling pathway	Interproscan
GO:1902287 all species →	Biological Process	semaphorin-plexin signaling pathway involved in axon guidance	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000001511.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.