Gene detail

Detailed information of BRAKERKYLP00000002007.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_038055760.1, uridine 5'-monophosphate synthase-like [Patiria miniata]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q42586	Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana OX=3702 GN=PYRE-F PE=2 SV=2
P11172	Uridine 5'-monophosphate synthase OS=Homo sapiens OX=9606 GN=UMPS PE=1 SV=1
Q5R514	Uridine 5'-monophosphate synthase OS=Pongo abelii OX=9601 GN=UMPS PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007946 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00156 all species →	Pribosyltran	Phosphoribosyl transferase domain	Domain	Interproscan
PF00215 all species →	OMPdecase	Orotidine 5'-phosphate decarboxylase / HUMPS family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR014732 all species →	Family	Orotidine 5'-phosphate decarboxylase	Interproscan
IPR000836 all species →	Domain	Phosphoribosyltransferase domain	Interproscan
IPR001754 all species →	Domain	Orotidine 5'-phosphate decarboxylase domain	Interproscan
IPR023031 all species →	Family	Orotate phosphoribosyltransferase	Interproscan
IPR004467 all species →	Domain	Orotate phosphoribosyl transferase domain	Interproscan
IPR029057 all species →	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan
IPR018089 all species →	Active_site	Orotidine 5'-phosphate decarboxylase, active site	Interproscan
IPR011060 all species →	Homologous_superfamily	Ribulose-phosphate binding barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19278 all species →	OROTATE PHOSPHORIBOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004590 all species →	Molecular Function	orotidine-5'-phosphate decarboxylase activity	Interproscan
GO:0044205 all species →	Biological Process	'de novo' UMP biosynthetic process	Interproscan
GO:0004588 all species →	Molecular Function	orotate phosphoribosyltransferase activity	Interproscan
GO:0006222 all species →	Biological Process	UMP biosynthetic process	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13421	UMPS; uridine monophosphate synthetase	EC:2.4.2.10 EC:4.1.1.23	Drug metabolism - other enzymes	ko00983	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.