Gene detail

Detailed information of BRAKERKYLP00000002185.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: NXJ21672.1, COQ3 protein [Dicrurus megarhynchus]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000002185

ATGTGGAACAATGACCAGCAGCAAGGCACTTGGTGGCCTAATTATAATTATCAATATCAGGCTGCAAATGAagATGGCGACAGAAGTCAGGAATGGGCTGTCAAAGCTGCAATGTGGGCACAACAACGCCAGATGCAAGAGCAGATGTTGCAGCAGCAACACCAGCAACAGCCACCACCCCCTGCTGATGCTAGCAACCCACCACTCCCACATGAGACTGCCCCACCACAGCCACCACCTCCAGATGCCCAGGTAAATGGGCCTTATATTCATAGTGAACGTTTGAAGAAGCTTCAGGATGATAGCAATGATATTGAGTCTTCAGATTCATGGGCAGATAGTCATGGAAAACAGCAAGGATTTAATCGCGAGCAGCATTATGGCAGGAATGATCAACAGGAAAACTGGAAATCATTTGGGAATTTGGATTACAGTGATCACGGCCATCCCAATAGTGATTTTGTGGAAGGAAATGACTTTGCTGACCGCCATGATGATCATTATTctgaaaatcaaaattacaATTCTAATAACTTGCAATACCCAGAGGACCAGAATTTTTGGGACCCGCCTCATAGTCAGCAATGGACTCATGGAAATCATTCTCAATTCCCACCTCATCATGGCATGAATTTCCCACCAGCACCATTTGGTCCAATGCAAGGAGTGCCCACTCCCATGATGCCAAACTTTTATCCTCCAGACCCAAGACCTAACATGTCTATTCCAGAACAGGTAATTGCCTCTCAGATCCCAGAAGTAAATGTGCAAGAATCCAATAAGCGGAAAGGTTTGCCGCAATGGCTGCGGGATGCACTGagtaaaaaagagaaagaaaagcaaaagcAGTTTGAAAAAGAAAGGGCAAAGAAACCTGTAGATGATGAAAGTGACGAAGAAAAAGCTATCTCAAAGGGTTCAATTGACTTAAAACCTTCTCCCATCAGAAAAGGTACTTTGGAAAGACGCGGATCACCATCAGGATTCATTTCTAAAGTAAAACACAGTGGTTATAGTTCAGATGACGAAAGTGATGGTGCTGAATCAGAGGAAGAACACCAAAACCAGCCTGCAGAGAGAGAATTATCGGCAGAAGAAAGAGCCTATGAGCAGATGCAGAAGATCAAGCAATGGATGATGGAAACCCTGGTTACTGTCACAAATGAAGAGATTGTAAGTGTTGTTAATGAAGTTTACAGTCGTGCTCGCAAAAAAGCTTTAGATTACGACTCAAGTAGTGGAAATGAAAGTGACGATGAGTCAGACGATTCGGGAAAACAAAGCAAGTGGTATGAACATGAGAGAAAAGAGCGTGAAAAGCGTATCAATGAACGTGCTGAGCATCATAGCCAGCGTGGTCGACACGAGAATGAGCGTTCAGTTTATGACAAAAAGGAATTTGACAAATTAGGCGCCAGTGAAAGCAGACATGAGAAAGAGAGGCGACGAACAGAGGTTTCAGAAGATGGGGATGAAAGAGAAGGCAGGGACAGACAGCTTCCAAAATTAGGTAGTCATGAAAGCCGTAAGGAAAACCCTGAAAAAACTGCAAAAGAACACAGGGAGAAAAAAGATGATGGCACGAgaagatcgaaaagtgatgtgAAATCTAAATCGCGAAAGAGCCGTGTACCAAGTGATGAAAGTAGCTCAACAGAATCCTCATCAACGGACGATAGCGATGACAAGAGGAAACAaaggaagaaacaaaagagaacTAGGGAGTCTGATTCTGAAAGGGGAAAGGCTAGGGGCAAGAAGCATAAAAGGGAAAGTATAGGAGATAGAAGAAGAAGTAGACGAGAGAAAGAGGAATATAGTAGTGATGGCAGTTTAGATGTGGATAagggaaagaaaagaaggaGTGAACGAAGAAGTGACAGTGAGAGTGAGAGTAGTAGGACACGAAGCAAAAATGGTAGGAGACGATCAGGTGTATTAGAAGTAAAAGATAGGAGCAGAGAAGGCGATCGGAAAGGTAAGAAAACTGGTGATAGAGAGTCGAGACAGAAAGgggagaaagagagaaaaaaggACAGAGATTCTGAACACAGAAAAAGATATGATTACAAAAGTGGTAAATCTTCCAAGAGGAAATCTAAATATTCAACCAGCGAAAATTCTGACGATTATAGTGATTCCGAACCAGAATACAAAGAGAGAATAAAAAAGAGAGAGGCTTCAGAAGAGACAACATCTACGGATGAGGTTCAAAAGTTTGGATTACTTTCTTCAGAATGGTGGAATCAAGCTGGTGATTTTGATGCcttaaaagcaatgaataaactTAGAGTGCCTTGGATAAAAAGGATTTTGTTGAAGGGGTCAGAAATGAGATTAATTAAGCCATTAGATTCATTCAGGATTCTTGATGTTGGATGTGGTGGAGGACTTTTATCAGAGCCTTTGGCAAGACTTGGTGCCAAAGTAACAGGCATTGATGCTGTGGTCAATAGTGTATTAACTGCTGAAATGCATGCCAAAATAGATCAGGATGTTGCCAAGAATGTAACCTACATGTGCTCAACAGTTGAAGAAATGGTGGATCAGTATAGAAATTCATTTGATGCTGTTGTTGCATCAGAAGTCATTGAACATGTTAACAATCAACCTCATTTTATCAAATCATGTTCTGAGCTCATCAAGCCAGGTGGCCACTTGTTTATAACAACAATCAATAGGACTTTGCTTTCGATGATCTTTGCAAAGTTTGCAGCGGAGTACATTGTGAGAATAGTTCCAGCTGGTGTGCATGATTGGAGTAAATTTGTTACAACGGAAGAGTTAACAGATATGCTTAGAAGTTCTAAACTTGAAATGATAAATTTCAACGGAATGACATATAACGTTCTCACTCGAACGTGGGATTGGTGTTACAGTACGGACATGAATTATGCGTGTCATGCCCAAAAGTCAGCACGATAA

Transcript

BRAKERKYLT00000002185

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q63159	Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq3 PE=2 SV=2
Q8BMS4	Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Coq3 PE=1 SV=1
Q9NZJ6	Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=COQ3 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004812 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08241 all species →	Methyltransf_11	Methyltransferase domain	Domain	Interproscan
PF15996 all species →	PNISR	Arginine/serine-rich protein PNISR	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010233 all species →	Family	Ubiquinone biosynthesis O-methyltransferase	Interproscan
IPR031937 all species →	Family	PNN-interacting serine/arginine-rich protein	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR013216 all species →	Domain	Methyltransferase type 11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31518 all species →	ARGININE/SERINE-RICH PROTEIN PNISR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006744 all species →	Biological Process	ubiquinone biosynthetic process	Interproscan
GO:0008425 all species →	Molecular Function	2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0016607 all species →	Cellular Component	nuclear speck	Interproscan
GO:0048786 all species →	Cellular Component	presynaptic active zone	Interproscan
GO:0008757 all species →	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00591	COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase	EC:2.1.1.114 EC:2.1.1.64	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.