Gene detail

Detailed information of BRAKERKYLP00000002841.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_042212010.1, homogentisate 1,2-dioxygenase-like [Homarus americanus]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VKJ0	Homogentisate 1,2-dioxygenase OS=Drosophila melanogaster OX=7227 GN=Hgd PE=2 SV=3
O09173	Homogentisate 1,2-dioxygenase OS=Mus musculus OX=10090 GN=Hgd PE=1 SV=2
Q93099	Homogentisate 1,2-dioxygenase OS=Homo sapiens OX=9606 GN=HGD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005548 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20510 all species →	HgmA_N	Homogentisate 1,2-dioxygenase N-terminal	Domain	Interproscan
PF04209 all species →	HgmA_C	Homogentisate 1,2-dioxygenase C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011051 all species →	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR046452 all species →	Domain	Homogentisate 1,2-dioxygenase, N-terminal domain	Interproscan
IPR005708 all species →	Family	Homogentisate 1,2-dioxygenase	Interproscan
IPR046451 all species →	Domain	Homogentisate 1,2-dioxygenase, C-terminal domain	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11056 all species →	HOMOGENTISATE 1,2-DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004411 all species →	Molecular Function	homogentisate 1,2-dioxygenase activity	Interproscan
GO:0006559 all species →	Biological Process	L-phenylalanine catabolic process	Interproscan
GO:0006570 all species →	Biological Process	tyrosine metabolic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00451	HGD, hmgA; homogentisate 1,2-dioxygenase	EC:1.13.11.5	Styrene degradation	ko00643	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.