Gene detail

Detailed information of BRAKERKYLP00000003427.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_046849635.1, LOW QUALITY PROTEIN: glutamate synthase [NADH]-like [Xenia sp. Carnegie-2017]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000003427

ATGGAGGAATCATCATCGATTGCCTGTTTTTCTCCATTACTCAAAGAACGAGATGCTTGTGGAGTTGGCTTTGTTGTCGATATCAAAGGGCGAGCTTCCCATAAGATTTTGCAAGAATCACAGAGAATGTTGATACATATGAATCACAGAGGTGGTTGCCAATGCGATGATACTGGTGATGGCGCAGGGGTAATGACTGCCATACCCCATACATTCTACAGAAAATATCTTGCTGACCATCTGTACAACGGAAATGTTAATGATGTACCTGAGCCAGGTTGCTATGCAACTGGTATTCTATTTTTGGATGTTGATACAAGCAAGGCAAGTGAATGCATGTTGGAGGTGGAAAGAATCGCATCTGAATGTTCCCTGAAGGTTATGGTATGGAGGGATGTTCCTTGCAACACATCAGTCATTGGAGATTGGGCACGAAATTTACAGCCAACGATGAAACAAGTATTCTTAACGAGCAGCCTCTCCAAAGCAGACTTCAGAAAGCAGGTCTATCTCTGCCGAAAAATTGCAACACACAAAATTCCTCGCAATAACAGAAGATTCTATTTGTGCAGCTTGTCAAGCGAAACAATAATTTACAAGGGATTATTGACACCAAAGCAACTAGCGCAATTTTACATGGATCTGAATGATGAGGCCTATCAGACACATTTCGCCTTGGTGCATAGCAGATTTTCAACAAATACAAATCCAAGCTGGGAACGGGCTCATCCTCAAAGACTGCTTGCTCACAATGGCGAAATCAACACAATACAaggaaacataaaaaatatgtTTGCAAGGGAAGGGAATATGAGCAGTGAATACTATGGAAATAACCTGCAAAGGTTGTTTCCAGTAATTGAAGCTGAACAGTCCGATTCAGGATGTGTTGATAATGTTGTTGAATTTCTCACCATGGCCGGAAACAGATCTTTGCCCGAGGCTGTGATGACTTTGGTACCAGAAGCATGGCAAAATGATCTGCATATGACACCTGAAAAGAAACTTTTTTACAAATGGGCGTCGTGCTCAATGGAGGCATGGGATGGACCAGCTTTACTAACATTCTCAGATGGACACTATATCGGTGCAGTTCTAGACAGAAATGGTTTACGTCCTTCGAGATATTACGTCACAAAAGATGATAAGATGATTATGGCAAGTGAGGTTGGCGTGTCGACTGTAGCTCCAGAGAATGTCACTTACAAAGGACGACTTATGCCTGGTCGAATGTTACTAGTGGACACAAAACTTGGATCAATAATCAAAGATGAAGAGCTAAAGCGAAAAATATCAACTGCTCGCCCTGTGAAGCAATGGATAGAAGAGAATTTGCTGACACTCGATCATTTTCGAGCTGCATACATAAAGGAGCATGGAAGAGCACCTGATGAGATTTCTCAGAAGAGAACGTCATTGTCAATGGGAGGTATATCTGTCGAGACTGACAGGAGAATGCCTCTTTTTGGCTATTCAGTTGAAGATCTGAACATGCTCCTCTTGCCCATGATTGTAAATTCAAAAGAGGCTCTTGGATCGATGGGCAATGATACTCCACTTGCGTGTATGACAATGTATCCTCAATTGGTGTTTGACTATTTTAAGCAGCTATTTGCACAGGTCACAAATCCTCCAATCGATCCTTTCCGAGAGAAAATCGTCATGTCCTTGGAATGTCCAATCGGTCCAGAAGCTAATCTATTAGAACCAAATGCTAACCAATGCAAGAGGATTATTCTGGAAAGTCCTATATTATCACCTGGAGAATTATTGCTGATGACAGAGCCACTATTGCCCGCATGGAAGACCGAAGTTCTTGATCTAGTCTACCCAATTGATAACGGTTTGGAAGGCCTCGTCCCTGCTCTGGATTCGATCTGTGAAAAGGCATTCAATTGTATCAAGAATGGCacatcaatgattttgttgACAGACAGAAAAGCTGATCAGAACAATGTTCCAATCAGCTCACTCTTGGCAACTGGGGCCGTTCACCAATATTTAATTAGAAAGAAGTCAAGAAGAGGTGTGAGCATCATTGTTGAAACTGGTGAAGGCAGAGAAATTCATCATATATGTTTGCTTCTTGGCTATGGGGCAGATGCTATATGTCCTTATATCGTTTTTGAGACCTTCAGTAAACTCAGAGAGAGTGGCCTATTGGATCCACCATTAACAGATGAACAAATAATTGCTAATTACAAAACCGCTGCCCATACTGGCATTAGAAAAGTCATGGCCAAAATGGGTATATCTACGCTTCACAGCTACAAGGGGTCGCAGATCTTTGAAGCAGTTGGTTTATCAAAAGAGGTAAGAATTTTGAAAGTCTTTTTTTCTACTCAAACCAGTTTGTACTGTTTGGATTAA

Transcript

BRAKERKYLT00000003427

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9C102	Glutamate synthase [NADH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=glt1 PE=1 SV=1
Q0JKD0	Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0681900 PE=2 SV=1
Q0DG35	Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0555600 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00310 all species →	GATase_2	Glutamine amidotransferases class-II	Domain	Interproscan
PF04898 all species →	Glu_syn_central	Glutamate synthase central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050711 all species →	Family	Electron transfer and nitrogen metabolism enzyme	Interproscan
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR017932 all species →	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR006982 all species →	Domain	Glutamate synthase, central-N	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11938 all species →	FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006537 all species →	Biological Process	glutamate biosynthetic process	Interproscan
GO:0015930 all species →	Molecular Function	glutamate synthase activity	Interproscan
GO:0016040 all species →	Molecular Function	glutamate synthase (NADH) activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0019676 all species →	Biological Process	ammonia assimilation cycle	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000003427.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.