Gene detail

Detailed information of BRAKERKYLP00000003868.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: KAJ7388934.1, AP-4 complex subunit beta-1 [Desmophyllum pertusum]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y6B7	AP-4 complex subunit beta-1 OS=Homo sapiens OX=9606 GN=AP4B1 PE=1 SV=2
Q9WV76	AP-4 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap4b1 PE=1 SV=2
Q9LDK9	Beta-adaptin-like protein A OS=Arabidopsis thaliana OX=3702 GN=BETAA-AD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004996 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026739 all species →	Family	AP complex subunit beta	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016342 all species →	Family	AP-1/2/4 complex subunit beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11134 all species →	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0030276 all species →	Molecular Function	clathrin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000003868.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.