Gene detail

Detailed information of BRAKERKYLP00000004082.1 in Mastigias papua

Genomic Location: chr11:14509505...14528339
NR annotation: CAH3152388.1, unnamed protein product [Pocillopora meandrina]
Species Mastigias papua · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERKYLT00000004082

ATGGCGTCGATGTCTGATGAGGATGGCAATGCAAGTTTTTGGAGTGTTGGACGTTCTAGGAGAAGGCCTTCAAAAAAGCGAAGCAGGTCAACTTCAGATGTGAGAAAGAGTCCTTCAGTGAGAAAAATTCTCTCTGCTAGTGAGCTCCGTGCGTCTGGTATTGTTCATATCTTAAACCTGAAACTGGCCTATATTTCAGGTGAGGAGGCCACTAATTTGCTCATTGCAACTTGCATATCCGTTGCAACTTGCAGCCAGAGGTCGTTCTTGAGATCAGTGGCTGCGACTGTCCTCGTTGGTGGATTAGATAAGAATGGACGTTGTTTGGTGACGATACCTTCCAACAAAGATCAAAAAGTGTCTGCAGAGTCCTCAGGAGTGAAATACGAGGAGCTTTCCATGACATTACAATATCTGAACAAAGTTCCTAGTCAAGACCATCAGCAAAGAGGACTAACTGTTATCCTGGATCTACGTGGAAATGCTTGGAAAGAGACGAAAAATTTTCTGAAGCTAATTTCGGATTGTCTCAACTACGTCAAGCAAGTCCTCATAATCAAACCGGATGATTTTTGGGAGAAAAGAAGGTCGAGTTTTGGTTATAAAATCCAGAGATCAGGGCTTGGATTCGACACTGTGCTACTGTCAACACCTACAAAGTTATTTCAATACTGTGACCAAACTGAAGTCACTGAGGACATGGGAGGATTTCTGCATTATGATCACAGCGTCTGGTTGAAATTGCGAATGAATTTCGAGACATTCATCGAAAAACATGCGGATTCAATGCGGCAGCTGAACGATATACAATTCCTACTAGAGGAAAAGAACATTCCTGCGGATTCAGAAATTTGCAGGGATTTTATCGCGGAACACGAACTACTCCAACTGAAAATCTTTGACATTATTCAAAATATCGTTCCGTTGGGTGAGAGCGTTCTGGCTGACCTACAACTTCAAGGAGAACCACTACCAGGTGATCCTGTTGCGGCTTACAGCATGGACAGCGCTTTGATCGATGTCGAAATAGCAATGGATGGCCTGAAAATCAGGGAGAAAACAATAATGGATTCATGGCAACAGAAGAAAACTTTTCTTCAGCAGTGCTTGAGATTTCACAAATACGAAGAGGGCTATAATAAGGTCTTGGATTGGGTAACTGGTCCCGGACTTGACCAAGCGACGAAAAGCTGGGACATTGGTGTTTCGGTATCGTCTGCGGAGACTTGTCGAAAGGAGCATGAAACTCTTGATAAAGCGACCAAGCCTTTCATCGAGTTATTTGGGCACCTGCGACAGGAATGTCGGGACATGTTGCGGGAGGATCACTACGCATCTAAAGAACTCAAACATCGAAAAAAGTATTTGGACATGATATGTAAGAATTTTGCTGATTACATGGAAAAGAAAAGATCCATGATTTTGACGTCAGTTAAATTTCACAAACATGCTATTGAGTTCGCTCGTCGCCAAGATGATCTCCTCGACTTTTTGTGCACCGAATCAGAAGCAGTGACAGATGAGTTTGCAGAAGCAGAAAGCATGATGGAAACCTTGCgagaaaaaatgaaaaATGTAAATGAAGCCACAGAGAAAACACTCAAGGGGGGCAATCAAATCATATCGTCGGCAAATGAGAAAATTTTCAGCGCAACAGGTACCGATATAACTCCAGATTTCACAGACGCTATAAAGCACTGTCAAACTGTCATGGACGAACTTAACGACAGAAAGCAAAGATCAGATGAATTGTCTGAAGTTCGGAAGTTGAAACTGCAACAATGTGTGCAACTGAAAACGTGTGAACGTGATGCGGAACAGGCCGTAGTTTGGCTGAAAGAACTGTATGATGTTATGATCAACACCCAATTAGATTTAGGACGGAGCCAAGACGAGATtcagaatttgattgcagaacACGAAAAGTTTGAGACAACTGCCAAGgGGACATTCGATTATGGAAAACAGCTATTGTCTGCCGCTTTGGTGCTGAGAAGATCGTCTCGATTCAATACCGAGGCTAATGAAGCAATGACGAATGACCTCGAGGGAATCTGGGAACAATTTGAGATCGGGTTGCAGCAGCGAGCTGAAAGGCTGTCACTTGCTGGCAAATTTCAAAGGAAATTCGCGAAGGCATTCAAAGAAATGGAGGAAGTTTCCAGAGGAAGTTTTAGTGACTATCCGGATTCATTGGATGACAGAGATGAGATTCTTGAGGATATCCGCGAAACTCTACGTGAGAGTGTTGCGGAGGCTTTGTCTGTTGGTAAGGCGCTTTTAGATCAGCTTCGATATCCAATCACTGAGTTCACGGAAGCTGTCGATGCTGGAGGAGTTATTGAAGAATTTGAGAACCTGGTTGATGCCATGAAAACGAGGCAGCAGGGTATCGATGGTGTAGTTAAAAGGTTTGGAGAAATACTGGACAAGCGTGATTCTGGAACAGCCGTTGCACCTGTTGAGAATTATGTTGTTAGTGAGACACCGTTGATGGTGGAAGTTGAAGTATTTGAAAAGGAAGTCCCTGTTCAATTTGCAAGCGAGAAAATGGATGGCAAATCACTCAAGGAGGAATCGAAAATTGAGGAAGGGCCTAGTTTGGTAAAAATCATTGGTGACCTCCAAGAAATCACTAGAAAATCCACGTACAGTGACCTTTCATTTGGACTTGACTATGATGAAGCATGCACACTCAGTGATCAGCACCGAGGCCTTGAATTGCAATTGAAGGAAACTGAGAGCCACATTGAGGAGCTGCGTGCAAGCCGTAAACTTTCCAAAAAGGAGGTAAAGACTGACTTGTGGGAAGAGTCCATCGATAAACACCTTGAGACAGCCAGAAAGAACATAAAATCAAGAAGGGAGATTGTTGACCGTTCAGTTGAGTTCCATGACAAGGCTAAAACGGTAAGGAGATATCAAAAGTTGTAA

Transcript

BRAKERKYLT00000004082

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86VW0	SEC14 domain and spectrin repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=SESTD1 PE=1 SV=2
Q80UK0	SEC14 domain and spectrin repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Sestd1 PE=1 SV=1
Q7SX85	SEC14 domain and spectrin repeat-containing protein 1 OS=Danio rerio OX=7955 GN=sestd1 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001183 (this species only) · gene tree & orthology

Pfam domain

No Pfam domain signature was recorded for BRAKERKYLP00000004082.1 in Mastigias papua.

InterPro

InterPro term	Type	Description	Source
IPR018159 all species →	Repeat	Spectrin/alpha-actinin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46607 all species →	SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005546 all species →	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0010314 all species →	Molecular Function	phosphatidylinositol-5-phosphate binding	Interproscan
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0043325 all species →	Molecular Function	phosphatidylinositol-3,4-bisphosphate binding	Interproscan
GO:0070273 all species →	Molecular Function	phosphatidylinositol-4-phosphate binding	Interproscan
GO:0080025 all species →	Molecular Function	phosphatidylinositol-3,5-bisphosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000004082.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.