Detailed information of BRAKERKYLP00000004434.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_031573134.1, DNA ligase 4-like [Actinia tenebrosa]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BTF7DNA ligase 4 OS=Mus musculus OX=10090 GN=Lig4 PE=2 SV=2
Q90YB1DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2
G3GTP0DNA ligase 4 OS=Cricetulus griseus OX=10029 GN=LIG4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002928 (this species only)

 Pfam domain
No Pfam domain signature was detected for BRAKERKYLP00000004434.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR029710
all species →		FamilyDNA ligase 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45997
all species →		DNA LIGASE 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003910
all species →		Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005958
all species →		Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complexInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006297
all species →		Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0006303
all species →		Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0032807
all species →		Cellular ComponentDNA ligase IV complexInterproscan
GO:0051103
all species →		Biological ProcessDNA ligation involved in DNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000004434.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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