Gene detail

Detailed information of BRAKERKYLP00000004446.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_033111831.1, C-1-tetrahydrofolate synthase, cytoplasmic-like [Anneissia japonica]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000004446

ATGATAGACTTACCAACGCAGGAGCATAACATGAAAACTGGTGTGGTTGCAGTCGTTCTATGGTTGGAGTTAAGTTACCAGGTTTGGAAGTTATCCGCCTTACCATTAGAATTGAAGAGACCGGTGCCAAGTGACATTGATATTTCAAGAGCACAAAAACCCAAACACGTCAGTCAATTGGCAGAGGAGCTGGAGTTGTTGCCTGAAGAGATTGATTTTTATGGGAAGTCAAAGGCAAAAGTATCACTGAGTATTCTTGATAGACTGAAAGACAAATCAAATGGGAaatatgttgttgttgctggTATCACACCTACCCCCCTTGGTGAAGGCAAGAGTACCACAACAGTTGGATTGGCCCAAGCATTTGGTGCACACCTTCAGAAGAATGTCTTTGCCTGCCTGAGACAGCCTTCTCAAGGACCTACCTTTGGTATTAAGGGTGGTGCTGCTGGAGGAGGTTACTCACAAGTTATTCCAATGGAAGAGTTCAACTTGCATCTGACTGGAGATATTCATGCAATCACGGCAGCAAATAATCTTTTAGCTGCTGCAATTGATGCAAGGATTTTTCATGAATCAACTCAATCAGATAAGGCATTATGGAACAGATTGGTACCAGAGAAAGATGGAAAAAGAACATTTGCACCAGTTATGATGAAGAGATTGAAGAAATTGGGAATAGACAAAACTGAGCCCAATGATCTGACCAatgaagaaattgcaaaatttgtgaGGCTCAATTTTGATATGAATACAATTACCTGGCAACGAGTGGTCGATACAAATGATCGATATCTCAGGAAAATTACTATTGGTCAGTCTCCAACTGAAAAGGGCAAGACAAGAGAGTGTCAATTTGACATTACTGTGGCAAGCGAGATAATGGCCGTTCTTGCATTAACATCAGATCTTAGTGATATGAGAGAAAGacTTGGCAAAATGGTTGTTGCAAGCAGCAAAGATGGCACCCCAATAACTGCCGATGATCTAGGTGTCGGTGGGGCATTGGCTGTCTTAATGAAAGACGCAATTAGACCAAATCTTATGCAGACACTAGAGGGAACTCCTGTGTTTGTCCACGCAGGACCATTTGCAAACATAGCGCACGGCAATTCATCAATTTTAGCCGACAAGATTGCTTTGAAATTAGTTGGTCAAAATGGTTACGTAGTGACAGAATGTGGATTTGGTgcagatattggaatggaaaaGTTTTTCAACATCAAATGCCGTTATAGTGGTTTGTTACCAAATTGTGCAGTAATTGTGGCAACTGTTAGGGCGTTGAAAATGCACGGAGGAGGGCCCAAGGTTGTTGCTGGCCAACCTTTAGCAGATGCTTACAAGAGTGAGGAGCTCAATCTTGTTGAGAAAGGATTTTGCAATCTTGGAAAGCAGATCgcaaattcaaaattatttggTATTCCTGTTGTCGTTGCTGTAAACAGATTTAAaACCGACACCGATGCTGAGATTGAGTTGATTCAGAAACTGAGCAAAGATGCTGGAGCATTTGATGCCGTTTCTTGTTCCCATTGGGCAGATGGAGGTGCCGGTGCAGTTGATTTAGCCAAAGCAGTTGAGCAAGCGTGCGATGAAGACAGCAATTTTGCATTCCTCTATTCCCTCGAGTTACCAATCGAAGAGAAGATTGAGATAATTGCGAAAAAGATCTACGGTGCTGATGGGATTGAGCTAGAGGACGAAGCTAAAGAGAGAATTGATAGATACAAAAAGCAGGGTTTTAATGACCTGCCAATTTGCATGGCAAAGACACACCTTTCATTATCTCACAATCCAGAACTGAAAGGTGTTCCTGTAGGTTTCACATTGCCTATTCGAGATATTCGGGCTAGCGTTGGGGCTGGATTTCTCTTTCCTTTGGTCGGCACGATGAGTACAATGCCTGGATTACCAACACGCCCTTGTTTTTTCGATATTGATATCGATCCTGAAACGGAGGAAATTTCTGGGCTCATGTGA

Transcript

BRAKERKYLT00000004446

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P11586	C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens OX=9606 GN=MTHFD1 PE=1 SV=4
Q922D8	C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4
Q5R8P0	C-1-tetrahydrofolate synthase, cytoplasmic OS=Pongo abelii OX=9601 GN=MTHFD1 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001689 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01268 all species →	FTHFS	Formate--tetrahydrofolate ligase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000559 all species →	Family	Formate-tetrahydrofolate ligase, FTHFS	Interproscan
IPR020628 all species →	Conserved_site	Formate-tetrahydrofolate ligase, FTHFS, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

No PANTHER signature was detected for BRAKERKYLP00000004446.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0004329 all species →	Molecular Function	formate-tetrahydrofolate ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000004446.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.