Gene detail

Detailed information of BRAKERKYLP00000004726.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047145949.1, fibropellin-1-like isoform X2 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000004726

ATGGCCGATAGGCCGACATTTGCACTTTTGGGCTTTTTAGTTATaaattttgtgatttctttGCATGGGAAACATGTAATAGTCAAGCGGGACCTGATCGAAGAAGATGATGTTGTTGATTTGTCGTCGGACCTGTTGGCGGAAAGGAGATTTCCGGAGAAAAGAGATTTATTTTCGCAATCTTCGCAAACGTATGCTGTATCGCCTGGAAAAGTTGTAGATGAAGAAGCTGATGATAGTTCAGACCCTGATGGATCTGAGGAAAGCAGCGGCGATGTTTCCGGCTCTGGCTACCAAAGAGAGACTGTAGCTGAGGGAGCTAGCGACATTGATGGAAATACTGAAGATGACGAGCAATCCGAGAACACATCGGATGAAGCTGAAACGAACGAGCCCGAAAGTGCAAGCTTTACCAAAGAAAAAGTTGAAGCTATGCCGAGCTCTGCCGATAAGACGGAGACGAAACGGCAGTTCATCGCACACCCTCACTCCCGTTTCTATTCCCATCCCGGATACGTTTATTTAAAGGCTCCACCGATTCGGCAGAAAACGATTGTAACCACGCGCATTCCGAGACCACCGATTATGATGTCGTACAAGCAATTTCTTCACCGATTAGCACGCGAAAGATATCACGACGGATATCATTCACCTTATCACATGGAtgatgtagacgatgatgattaCCCAGAACGTGAAGAAGGTCATTGTGAAAGCGACCCATGTATGAATGGAGGCACTTGCAATGAAGTGAGAGACGGCTACGAGTGCATTTGTCCCAATGGATACAAGGGAAGTGACTGTGAAGAGGAAGATCGCTGCCACCCAAACCCGTGCCACAACAGTGGCGTTTGTACTGAGGCCAATGGCCAATACGTTTGCACTTGCCCACAAGGATTCAAGGGATTGAACTGTCAAGAGTTGAACAAATGCCAACCGAACCCATGCCATAATGGCGCAACTTGCAACGAGGTGAACAACGATTACGAATGCTTGTGTAGTGCAGAGTACACTGGGAAAGACTGTTCAGTGATCAACCATTGTCACACGACACCTTGTCTCAACGGTGGCATTTGCGCATCAAATGTTGGAATTGGCTTCTCTGGTCTCGTCTCATGTACCTGTCCACCTGGTTTCACTGGACAAAGATGCGAATTTCAGGATAAATGCCGCTATACTCAATGCAAAAATGGCGGAGTTTGCCGAGATGGCCATTGCAATTGCGTAAATAGCTACAGTGGTGAATACTGCGAAGTACCCCCGTCGCCCTGTTCTGTTACGCCATGCCTCAATGGTGGCACATGTATGGTCAAGTCATTAACTGAGTATCGATGTGTTTGCCGTCATGGATACAGAGGAAGCAACTGCGAATTGGAAACACAATGCTCTCCAAACCCCTGTCTCAATGCTGCCCAATGTGTTGACTCGGACGAAGGCTACAAATGCGAGTGTGCACATGGATTCAAGGGACATCACTGTGAAGAGGAGGCCTCATTTTGTGACGCATCTCCGTGTATGAATGAGGGCACTTGcttgaatgaaatatcaaagttCAAATGTCTTTGCAAGTCTGGCTTCCGTGGGGATCATTGCGAAGCAATTGATCATTGCCATGAGCACCCTTGCAAAAATGGAGGATTCTGTATCTCCGAAGGAGATGACTTCAAGTGCAAATGCTTAGATGGATACAGAGGATTACTCTGTGAGGAACAAGATAGATGTCAAGCAAATCCATGCCTAAATGGTGGAACCTGCTTTGAAAATTTAGCTGATTTAATGTGTACATGTGCCTCAGGATTTAGAGGAAAATATTGCGAGGATCGTGATCCTTGCCATCCCAACCCATGCCACCATGATGGTATTTGTGTCACAGAGGGTGATGACTACCATTGTACATGCCAAGGAGGCTGGATTGGCCACATTTGTGAAGATGAAGACAAATGTCACCCAAACCCTTGCCTTCACGGAGGTGTTTGTGTTGGAAGCGGTGGCTCATCATACCAATGTCACTGTCCAAGTGGTTTCATGGGCACACTATGCGAGGTAGAAGGCAACGGTGTAAGCATCCACGAAGCAGctCACCCATTGGTGGCATGCAGGGAAACCCATTATGGTTGTTGTCCAGATGGAGAGACTGCAGCCACTGGGCCCAGCGGCTTAGGATGCCCAGGTATTGATGTCTTCTAG

Transcript

BRAKERKYLT00000004726

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000270 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR051355 all species →	Family	Notch and Slit guidance protein	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836 all species →	SLIT HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007219 all species →	Biological Process	Notch signaling pathway	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000004726.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.