Gene detail

Detailed information of BRAKERKYLP00000005059.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_027046661.1, RCC1-like G exchanging factor-like protein [Pocillopora damicornis]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F2Z461	E3 ISG15--protein ligase Herc6 OS=Mus musculus OX=10090 GN=Herc6 PE=2 SV=1
O95714	E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q4U2R1	E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006857 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053035 all species →	Family	Mitochondrial GEF domain-containing protein	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46337 all species →	RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0070131 all species →	Biological Process	positive regulation of mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000005059.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.