Genomic Location: not available for this species
NR annotation: XP_047145711.1, PHD finger protein 3 isoform X3 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000005483 |
| Transcript |
| BRAKERKYLT00000005483 |
| Protein |
| BRAKERKYLP00000005483.1 |
| UniProt accession | Description |
|---|---|
| Q92576 | PHD finger protein 3 OS=Homo sapiens OX=9606 GN=PHF3 PE=1 SV=3 |
| B1ASB6 | SPOC domain-containing protein 1 OS=Mus musculus OX=10090 GN=Spocd1 PE=1 SV=3 |
| Q6ZMY3 | SPOC domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SPOCD1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003690 (this species only) |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF07744 all species → | SPOC | SPOC domain | Domain | Interproscan |
| PF07500 all species → | TFIIS_M | Transcription factor S-II (TFIIS), central domain | Domain | Interproscan |
| PF07533 all species → | BRK | BRK domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR006576 all species → | Domain | BRK domain | Interproscan |
| IPR003618 all species → | Domain | Transcription elongation factor S-II, central domain | Interproscan |
| IPR036575 all species → | Homologous_superfamily | Transcription elongation factor S-II, central domain superfamily | Interproscan |
| IPR012921 all species → | Domain | Spen paralogue and orthologue SPOC, C-terminal | Interproscan |
| IPR037259 all species → | Homologous_superfamily | BRK domain superfamily | Interproscan |
| IPR019786 all species → | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11477 all species → | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0006351 all species → | Biological Process | DNA-templated transcription | Interproscan |
BRAKERKYLP00000005483.1.
