Gene detail

Detailed information of BRAKERKYLP00000007568.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047134689.1, acyl-CoA synthetase short-chain family member 3, mitochondrial [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000007568

ATGGATGAAGATAGAGCTGTGGTACAACGCAAGAATGCAGTTAAAACCCAAGGAAGGACATTTCTTTCTTTGGGGCCTTTTGCTGCTCCTTCATTGAATGGTGTTTCAGATTTAGCTCTGATCTTGAGGTGCATTGGACGCCAAATATGGaaaggaaaacattgcaagCTGACATGGCCGCAGCATAGCAGCCATCGTTGCTTTGGAATATCTGCTTGGAAACGTACGACAAGCGGGCAGTGTAGTTATGAAGATGTATACAAACGATCTATCGAAAGCCCTGAAGAGTTTTGGGCGGAGAAGGCTGCAAATATAGCATGGTTTACACCATTTAACAAAGTATTGGACAATAGTAACCCGCCATTTTCAAAATGGTTTGTTGGTGGAAAGTTAAACACCTGTTACAATGCACTTGATTTGCATGTGGAACAAGGAAAGGGTGATAAGACAGCTTTAATATGGGATAGTCCTGTCTCTGACAATGTAAAAAAATTCACATACAAAGAGCTAAGAGATGAGGCTGCAAAATTTGCAAGGGTGCTTACCAATTGTGGTGTCAAGAAAGGAGATAGAGTTGTGCTATATATGCCAATGGTCCCAGAGGCAGCAATTGCCATGTATGGTTGTGCCAGAATTGGTGCTGTACATTCAGTTGTTTTTGGTGGTTTTGCTCCAAATGAGTTGGCTCGAAGAATTGACGATGCAGCACCAAAAGTTATTGTTACTGCCTCATGTGGTATTGAACCACACCGCCTGTTACCATATGGGCCTTTGGTTGAAAGAGCTTTAGAGATGGTTGTAAGGCCGCCAGAGAAAGTGATTGTTCTTGACAGGCCACAGCAATCTTTTGATTTGAAACCCGGTCGAGACATTGGATGGCACGAAGCAATGGCAGATGTCACAAGCCCTCATGACTGCGTCCCCGTTGACTCCAATGATCCATTGTACGTGCTGTATACATCTGGTACTACAGGGAGCCCTAAGGGCGTATTGAGAACCAATGGTGGACATGCTGTCGCATTGAAATGCTCCATGAAGGACATTTATGGCATAGATGAAAATGAGACTTGGTGGACTGCATCCGATATCGGTTGGGTTGTAGGACACTCGTACATCATATATGCTCCCCTACTTTACGGCTGCACTTCGGTTATGTTCGAGGGCAAGCCAATAAATTGTCCAGACGGAAGCGTCTTTTTTCGTGTAATTGATGACCACGATGTTGTCAGCTTGTTTACTGCACCAACTGCCATGCGAGTTATCCGTAACGAGGATCCACAGGGACATTACGCAAATAGTTATAAGATGTCAAAGTTTAGAGCCATATTTTTAGCCGGGGAACATGCAGACATTAAAACGCTGGAGTGGTCGAAGAAGGTGTTTAGATCGGCTGTTATGGATCACTGGTGGCAAACAGAAACCGGCTGGCCTATGACGTGTCACTCCGTTGGTCTTGGGATGCCTGACGATTACCCATTCGGTTCGTGTGGACGGCCGTGTCCGGGCTGGAATGTGAAAGTTCTGAATAGGAAAAAGGAAATTTGCAAGCCTGGTGAAATGGGAACTGTTGCAGTGGAGCTTCCTCTCCCTCCTGGTGCTTTAGCAACACTGTGGAGGAGCGATGATAGATTTGTCAACGCTTACCACACTACCATAGAGGGCCATTACGACACATTTGATTCGGctgaaattgatgaaaatggttACATAACGATTCATGGGAGGGTAGATGACGTCATTCAAGTTGCGGGACACCGATTATCTACGAAGCAGATGGAAATGGCCATCGCCCAACACCCAGATATTATAGAGCAAGCTGTTATTGGAGTTAAAGATGAAATCAAGGGTGAAATTCCAGTTGGATTAATTGTCCTGAGGGAAGGTGTCGACAGACACGAAGATGATATATTCCGAGAGGTTATTGATTTAGTTAGACTTGAAGTTGGCCAGGTTTCCGCCTTTAAGAGAGCAATCATTTTGCCAACCCTACCGAAGATCCCACAAACCGTTGAGAACGAAGATGATTTCAAAAAAGTCGAGTTGATACTCATGAAGGAGTTTCCTGGTGgacttgctttactgttctTTGTTTGCGAAAATTCTTCGAAAGCGAGCTATCACCAAGTATTGCGCCATACAGCAGCCAAGAACTGCATTTCATTAGTGCATCGAGTTGCCAGTTTGGTCGCAGCAGATCCTCTTGCAGATCTAACTGCAGATCCAAGCGGACAGGGCGGGAAATGCCTTCGGACACTTGGTGGCAGCAGTGGCACTTTCATGACAAAGAACTACCCTGCTAATTATCCGGACAACCAGAAATGTGCGTGGAAACTTGAAGCGGCTGGCAATACAGCTGACATAAAGCTGACCTTCCATGACTTCTCGTTGGAGCCAAGCAAACGCTGCTCATCTTATGACCATGTTGTCATCTACACACAAACATTCGGATCAAACACCTGGAACCAGATGTTACCTCTTGATGGGTATTGCGGAAGCGACCCGATTCCTACGAAGTTTGAGAGCTGCAAATTCATGCTAATTAAATTTGTATCTGATAATACGAACTCATTCAAAGGCTTTAACGCATCTTACTCGATCAAAGTCACTAcagATACGCCAAGgattcaatgtgttggtaagctGGGAGATGCCACGTGCAACAAAACAGTTTCTACAATAGAACAAAGCACACTTAAGGTTGCTTGTAACGCTACGGCCATCCCCCCTCCAACCTTCAAATGGAAAATGGAAAACGCGTCTAATCCTAACTCTTTCATTGATGTCCCGAGTGCAAGCACCAAGTATCACGCTGCCATCAATGGTATACTGACAATCAAGCAAGTGGCAATGTCTGATGCTAAGCGCTACATATGCATTGCCGAAAACAAACTGGGACAAAATTCCACAGAGTTTAGAGTTACCGTTCAAGAGAAATGCTCCTGCCCAAAGGAGATCACTACAAATTCCTACAACTATGCCCCATACTCCAAGTTCATATCCCAGTATGATGCAAAAGGTGGCGCTGTTTTTGATGGTATCTTCTACAGAATCCTAAACAAGATGATGACGCAATGTTGTGGAAACTGCTCAGGAGGGCATGGACCATCCTCCATCAAATGGGAGGACGAACCAGTCCTCAAGACCAAGTCAATGTCACTTATGAAAAACAATATCGGATTGTATGATCTTACTTTTCCAGTTGAAGGATCAAAGACTAGTGAGTACTACAGTTCGTCGCATTTGTTCGTTCCAATCGTTGATTCTCCCGGGTACGCTCTCCTGATCAAATACGACTCGAGTTCGCAATCAAGTGTCATATTTGAATCGATCTTAAATGGCTGGCCAATTCTTATCCTTACGATTGTTATGGCTGTCTTGGCTGGTATGATCATTTGGATGTTGGACACATACTGGAACGAAGAACAATTCCCACGTTCATTCACAGAAGGAGTTATAGAGGGATTCTGGTGGGCGTTTGTCACCATGACAACTGTTGGATATGGAGACATTGCCCCCGTCGGAGTTCCAGGACGACTGTTTGCCATAATGTGGGTTCTTACCGGATTGATAATTATATCAATTTTCACGGGAGTAATTACAACTGCCCTGACAGTTAGTAGTCTGAGCACGAGTTTGAAACTATACAGCACATCGGTTGGAGCGTTGAATGATTCCGGAGAATATAGTTATGCGGTCCGAAAGAATGCAAATGTATCAACACTGATGACAGCTGAGGAATTGAGCACTGGTCTTTACAATGCAAAATTCAAGGCGGTTCTTCTTGATGCTTACGTTGCTGCGCAATCCCCTGATTACTTCCCGAAGGCGAAGGCACGAgtcaataaaataataaaaacgaCAAAAGCCTTTGGATTTGTGCCTGGGCGAACAATCACGAACGATGATACTCTCATTAAATGCTTCAGAAACTATGTAGAACAGAACAAGCAGTCGATTTCTAAAGATGTTGAAGAAGCAACAAAGACTCTTGAGGAGGAAAGTAAAAGTGCTGCAGTTGAGAATGCAAGTGGCCTGTTTGATTCGAAAAGTCCGTTGTTCGTACAAGCAACCATTGTGTCATGCGTGCTGCTTGTCGTCCTGTCAATCCTTGGGCTTCTGTTCGAATATTGCTACTTGAAACCGAAGAAGATCATGCTGTTAGCGGCTAGAAATCTGGAAATGGTTGAAACACCTGAAATAAAGGAAATGGCCATGCGTGCGCAGAAGATGAAGGAAGTCCTGTTAGCAGAGATTAAGGAATTCCATGAAAGATGGAAGGAAAACGTCGTAGAACTTAGGCAGAAACACCAACAACAGCAAAAAGACTTTCTCAAGCATGGCCCTAAGAAGGAGGCTGCTCCACGAGCAAACGAGGCATTTGAAATGGAAGAAGCTTCACCGTCGCCACGTGCAGGTTCTACTGTCGCGTTTGTCAAAGAATCACCTCAAGCGTGA

Transcript

BRAKERKYLT00000007568

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5REB8	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Pongo abelii OX=9601 GN=ACSS3 PE=2 SV=1
Q9H6R3	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Homo sapiens OX=9606 GN=ACSS3 PE=1 SV=1
A0A0G2K047	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acss3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000999 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00060 all species →	Lig_chan	Ligand-gated ion channel	Family	Interproscan
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan
PF16177 all species →	ACAS_N	Acetyl-coenzyme A synthetase N-terminus	Family	Interproscan
PF07885 all species →	Ion_trans_2	Ion channel	Family	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR001320 all species →	Domain	Ionotropic glutamate receptor, C-terminal	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan
IPR032387 all species →	Domain	Acetyl-coenzyme A synthetase, N-terminal domain	Interproscan
IPR013099 all species →	Domain	Potassium channel domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43347 all species →	ACYL-COA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0050218 all species →	Molecular Function	propionate-CoA ligase activity	Interproscan
GO:0015276 all species →	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000007568.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.