Gene detail

Detailed information of BRAKERKYLP00000007994.1 in Mastigias papua

Genomic Location: :...
NR annotation: VDI71787.1, translation initiation factor 4G [Mytilus galloprovincialis]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000007994

ATGAGACCCAATAGCATTATGGGAGCGCATCCGTTGGTAGTAATTGTTCGTCTCCTAGACGTAGGATACGCCAGAACTGAGTGCATCGATTTGAAACTGCGATTTTTTGTAGCTGCAGCACTGGACCAACGGGGAGGACTCTCTCTTCAATCTAATGCAAGTGAGGTTGCACCCCGCCGGTATGGAGTGAAACAGAGCTATTTACGTCCTGCACAATCTTCAACTTATAAGCCTGGTTTGgaaaagaaagctaatgatGTGTCATCAAGAGATAAAAAGTTGTCATCTAGATCTCCAGATGCCTCAAAAACCAGCAATACCGGTCGTTGGGTCCCTCTTCATATCGTACAAGACATCACAAATAGCAATGAGGCTGTTTTTAGGAAAGTACGTGGCATCCTCAACAAATTAACACCAGAAAAATTTGATCGTTTAGTGTTTGAGTTGTTAAATCTTGGTATAAATAACAAGACTATACTTAAAGGGATAATACTTTTGatttttgaaaaAGCCTTAGAAGAGCCAAAATACAGCAGTTTGTATGCACAGCTCTGCTTGCGTCTCAGTCATGATGCACCAAATTTTGATGATCCTTCTTCAAATTCTACGAGTTTCAGACGGCTGTTGCTATCAAGGTGCCAAGAAGAATTTGAATCGAGAACCAATGCCACAGCTGTTTTTGACAAGCATGATGGGTCACTCAGTGCTGAACAGCAGGAAGAGAAAGCTATGGCAAAGAGGAAAATGCTTGGAAACATTAAGTTTATTGGTGAACTTGGAAAGTTTGGAATGCTGCATGAGGCAATCCTTCACAAATGCATTCAGCAACTGCTGGccaagaaaaagaaagcaaatgttGCCGATATGGGGGAAGACATTGAATGCCTTTGCCAAATAATGTCAACTGTTGGCAAGAGGCTTGATGTGCCCAAAGCCAAGAATATCATGGACCAGTATTTTGATCGCATGAGGATGCTCGCTGAATCGCCGGAACTGCCATCCAGAATCAAATTCATGCTCGAGGATTCTTTAGAGCTGCGTAGAAATGCCTGGATATCGCGTAGGATCAAGACATCCGAAGCTGGGCCCATACCCGTATCTAAGTTGCGATGGGAAGCCTTTGCTTCATCTCCTGTCCCTCCGCCGCCATTTATGCAGCTATCTTTCCCTCCATCCCCATTTGGTATGCCACCGCTAGGTATGTTTGGACAACCGATGCATCCAATGATGCCTGGTGGTATGTTTTCACCTGGTGGATTGAATGCTAGAATGCCTGATTTATCGATGGTGCAGGATGCACAAAAGGATATTTTTGGTAAAGACCCGACTCCAAAGAACCACCAActaatgaaaaagataaaggATAAATCTGAAGACCTGTTTGAACCACAttACCTCAAGAATAAGCAACCAACGACTCCCCCAACGCTAGCTGCCCCCGCCCCGTTGGCTGCGCAGCAGTTGGCCCCTAAACAGATCCGTTCATATGCATCGGCATCGCTGCCATCCAAACAGAAGCCATCTCCTCCTCATCAACAGACTCCTGCGAAGAAGTATGAGTTTTTTGAGAACGAAAGCCTTGGAGAAGCTCTTAAACCATCGAGAATGTCACCGTGGAACCCAGATCCCTTTTCAAAGAGCGTAACGCCACCACCTTCAGTTAGTCAGACACAGAATAGTTCTACTGCTGTTGATAGCAATTTTAATCAGGTCTCACAGCAAAATATTATTAATAAACCTGTTGTCAATGGCTACCAACAGGACATGGCGAACCCATTTCCGTTTTCAAGGTCATCTACACAGAAGTCAGGCAATATAAGTCTTCGCCCCTCGTCATTCCTCTCCATAACGAAGaaagatgatgaaataaagACAGAAAAGTCACCTCCAAAATCAGCAACGAATCCGGTCAATCTTATCATAAAAGACAAGCAAGAGAAGACAAAGGCAAAGAAGAACATCCTGTCGAAACCCGAGTTTGAGAGAAGAATAGAGATTGCACTGAAGCAGAACTCTCCCACAGGAAACATTGAGAATACTGTTCAGGCATTCAAAATAATCACCACATCCCAGTCTTATAGTAAACTGTTGGTACGGAAGGTTCTTAAAGACTCGTTACCAAAAGATAAACCCGCGTGGGATTTCATTGGAAGATTACTGGTGGCCTGTCAACAAAGTGACGTCATTGCGTCAGATACTTTGTTTAATTCGTTGGTAGCTCTTGCAGATGATATAAAACGCGGTTCACTGGAAAATGGAGTGGACTatttctcaacaatatcgacATTGCTAGTTGAACAGGACGCCCTCTCTTTTCCGGAATTTCGCGATTTCTTCTTAAATGGAGAGCTCTATCCCGGTTTTATAAGGGCCATGAAGAGACTTGCAATGGACAAAGGAGAGGAATGGCTCATCAAAAAGatagaagatgaaaaaattaAGATTTTGAGCACTCTGCCTGTTGAAAAacagacagagaaagacttacTAGAAGTCGCAAAAGAGGCTGACATCAAGTTTTTGTTTCCAGTATTGTTCATCCAATCACAGTTTGAAGAAGTTCTCAAGAATAATGATGGAATTGATAGTTTGAAGAACTGGATTGAGAGCACGCTGATGAGTGATATAGATATTAATCAAACTCCAGAGAAAGATATgcaagagaaagagaaagaatcgATCAAGGCTATAACGCCTCTGATCAAATCATTTGTAAATGAGAATAGCAAGCTGCAGGTGGAAGCAGTCTATAGCCTTCAGCAGTTCTGCTTTACAAATGGTTTCCCTAAAGGGATGTTACTCCGACTGTTCATCGCATTTTACGACCTGGAAATCATCGAAGAAGATGCCTATTTGAAATGGAAGGAAGACATTAATGATAGGTATCCCGGAAAAGGGAAAGCATTATTCCAGGTGAACACGTGGCTTCAGTGGTTGGAAACAGCCGATGAAGAAGACGAAAGTGATGAAGAGCAGACTGCCTATTTCATCGGAATTTCGGGCTTTGATGCGTCTAGGAGCTTTAGGAACATTTCCGAAGGTCTTGATGTTTACGTGCCAATATTATCCGAGACTGCAGCCCAGAAGAGGCATGCAAGCTCTCAGGACTTCCATCCACGACGAGGCCCAGGCGGAAGATCGTCATTTAGTGGGATCGTTGCAACCGTCTTCGGAGCAACTGGATTCCTTGGAAGATACACCGTGAATAGATTAGCTCGTTCTGGCAGTCAGGTTATTATTCCACATAGATGCATTGAAGACCATTTGAAGTACCTTAAACCAATGGGTGATCTTGGCCAGATTATGTTTAATaattttcatttgaaagatGAATCATCAATAGAAAAATGTGTACAATTTTCAAATGTTGTTATAAATCTTATTGGAAGAGAATTTGAAACAAGaAATTTCTCCTTCCAAGAGGCCCATGTTGAGGGTGCAGCTGCAATTGCTAGAGCAGCAAAGAAAGCTGGTGTAAAAAGGTTGATTCATGTGTCAGCTATGAATGCAGCAACTAATGCACCATCAACATTCCTGCAAAGCAAGGCTCTAGGTGAGCAAGCTGTAAAACATGAATTCCCAGAAGCAACAATAATTCGACCGGCAGAATATTATGGACATGAGGATAAATTTCTCAATATGTATGCCTATTTCAGAAATCTCCCTTTTGGTCAGCCTCTTATTAACAATGGTATGAAAACGATAAAGAGGCCTCCATATGTTGTTGATGTCGCTCAAGGGATTGTCAGTGCAGTTTTGGACGAGTCTGCTGCTGGAAAAACCTATGAACTCTACGGGCCTGAGGAATACTATCTCCACGATATAGTAGAGTATGTTTTTAAAATAATTCGTGAGCCATTTAGGCCGTACAGTATCCCGGAGAGTATGTACAAAATGGTTGCATTTTTCCTTGAGCAGTCTATCTTCGATCCAAGATTAACGAGGGATAAAATAGTGAGGCATTACTTGAGCGACGTTCCAAGTTCTCATGTTGGAACTTTTGAGGATCTACGAATTAGTCCTATCTCAATAAATGATGCTGCAATCACAATGCTGAGACGACATCGTGATATGCTGAATTACGACGATTCTCATTCTGAGGACGAGGTTTGCAAACCCGCAAGTGCGTATTGA

Transcript

BRAKERKYLT00000007994

Protein

Uniprot

Uniprot term	Description
Q95L46	Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus OX=9913 GN=EIF4G2 PE=2 SV=2
P78344	Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens OX=9606 GN=EIF4G2 PE=1 SV=1
Q5R7J9	Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii OX=9601 GN=EIF4G2 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan
PF05368	NmrA	NmrA-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045208	Family	Initiation factor 4G	Interproscan
IPR003307	Domain	W2 domain	Interproscan
IPR003890	Domain	MIF4G-like, type 3	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR008030	Domain	NmrA-like domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0016281	Cellular Component	eukaryotic translation initiation factor 4F complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan