Gene detail

Detailed information of BRAKERKYLP00000008987.1 in Mastigias papua

Genomic Location: chr15:1739637...1766915
NR annotation: XP_044182462.1, protein kintoun-like [Acropora millepora]
Species Mastigias papua · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERKYLT00000008987

ATGAGCGAAGCTAAAAAGGACATTGATGTAACACCAGAAGAGCTAGACAGAATTGGAAAAGCTCTCAAGGATGAGAAGTTTAGGACACTTTTCTTTGACTACTGCAAAGAAATTTCAGATCCAGAAAATAGAGCAAAGTATGAATTGGAAATTCAACAGCTTGAAAAGGAACGAGGATTTGATGTCAAGTTTGTGAAACCAGAGGCAGGACATGTGATAAAAGCGATCGATACGACAAATAATGAGAAAGTGTTTATCAATATTTGCACAAATCCAAATGTCGAAGGCGCGAAAGTAAGCGAACAGAGCAGACATGATGGGAAAAGGTCAGTCAACGGGGAAAATTGGATTGTCCCTCACATCTTGAATCCCCCTCGAGCTGATGTTGATAAAGCTGGGAAAGAATGCCGCGTGTGTGACGTGATGTTTAATCCCGATGTGTACGCAAAAGCAACCAAGcaaaaggAGATGATGAAAATGCTTAATAACATTGCCCTTGACTCATCAGAAGAGaaattcaatttgaaattagaCCGTCATAATATCAAATACCCAAAGCTTAAGTACAAAGGACGAGCAGAGGCTACGTTGTTAAGAAACAAAGATTCCTCCAATCCTGATGCAAAACTCGACGAACATTTGTCCAAGTTCGTCAGTTACCCGGAAGTGACGAAGGCATCGAGCCTGGAGACCGATTGTCCACCAGGCAAGACCGTATTGAATGGGGGAAGCGGTGCAGATATTGAAGAAATTAAACCTGTTAAAGAGAATGGTACAGCAACTGTACCTCGTTACAAGATCGTGCATAGAGGCCATTTCGAATGGCAGGATTACACAATGGCAAGGAGCGGTGTCACTAGCACAAGACCAGCAGAATTGTGCGTTGAAATAGAGCTACCGGCCATGAAATCAGCAAGTGGCGTGGATCTTGATATCATTGAACGGAAACTGGTTTTGAATTGTGAGAAGCCAAGTTACCATTTGGAGATAAACCTGCCATATCCTGTTGATGAGGACCATGGCACCGCAATGTTTGATAAAAGCAAGAGAAGCTTGATTGTAACTCTCCCTGTTATcaaaagttcttcaaatatatCAAAGGAAGTGGTTGAGGCAGAAAACAGGGATTGTCCCCAAGGAGGACAAGCCAGAAAAATTGACGAGTCTCCTTGCAACGAGAACGAGGCTGCGAAAGGTCAGAACCCAACATCTGAGCCTCATATTCCTCCTCTGGCTACATATGAAGAAGACTATCAGCCCGCTAAGAGTCCTGTTTCTGCTGCTTCCAAGCAAACTGCTATCGAGGACAGCAAACAATGGGACGAGAAAGATTGCTGCAAGGAAAATAGCTCTACCGGCTCAGAATTTGATGACAGAATGGAACTTAGCCAGCAAAATGTCTGCACCCAGAAAGGAGATTTCACTAGCTTTCTCTCAGATGCACAAAAGTCTAAAGACACACTTCATGACGTCAGTGTATCCAATGGCGATGCTGCTACGATGTTAGTAGAAAGAACTGAATTCTTGAAGAACCATCAAGTAGATggaaatatagaaaatattgcATCGGTACCTGACGTTGGTAAATTCGGGGATATAGCGAATGAAGAACAAATGATGAGAACTACAGCAAACAATCAGCTATTGTATACTGATCGTGGAAAGTGCAAAGATTCTGAAATGACGAGGACTAAGTGTGGAAATGAAAGCTTATGTGTGAATATGGGTGAAAATATCGGTGATTCAAATAGTTGTTGCAAAAGAGTAGCAGGTGGTAATGGTCCAGTCGATGAAAGCATGGCCTCTATAAGTACTGATATGTCAGAACAGCCAGTGCTTGATCAGGAAGCAGAGGATGCAGCATGTATGGAAGGTGAACCACCTGcgatattttctgaaagcagCGGCGATGGTGTTTTGAACGATCGTCTCAAAGAGGAGTCTGTGAGAATCGTTGCCGAGAAACTGCCAGAAGGTGAGAGCATGTCGCGAGAAAAAGTACATGATGACGCATCTTATACAGATAATAAGAAAATAGACGAGCACGGAGCTTTGAAGGATCGCCGTTATGAATGTTTAATGGCAAAAAAACCGACACTTAGTGACACTACGCATATATTACTTGAAGAAGACCAAGAATCTTATCTAGAGGATTGTACGAAATTGATGAATTCGTCGGATCCTTGCAGCTCAGTTGATTATATCCCTGAAGACGACATTGAAATGAGCATCAACATTGAGGGTCTGGCAGATTTGTCTGGAATGAATCAGCTGCCACCACTCGATTACGATCAGGACGAACAGACTGTAACCGTTAATATCAAATTGGAAGATGTCAAAGTTGAGGATATATCCCTCGGTTTCAGCTCAAGAAAGGTCTATTTCAGCATGATGTCAGCCAACGAAAGTGGTGATCCCGTCAGATGGTGTTTACTCGTAAAGTTCATGGAGTATTGTCGGCTCGACAAAGATCTTTGCTCTGTTGATGTCGAGAAAGATCGAGTTGTTTTGACTATGCCGAAATCTGAGGCGTCCTACGGTCTCTGGCACAGGATATTCATTGACCAGGCATTTTTTCTAAGAGACCTTGGCACAGAAGTGAACCTATCATTGCCCCCGTCAGCCACATTCTTACTTGCCATGTCTTCACAGGAGATGTTCTTCATGACGGACCACAGTATGTCTGAGCTTCTTGGCCGTTTGCATCAAGAGGAAAATCCTTGGGCGAAAGCTGCAATCGAAGTAGCGCCAGCTGCCAAGGACGAGGAAGGATCTGAAGTGGTGGCCCGGAGACTTGAGCAGCTGTTGCGGGAACAAGAGCATGGATTCACGGAATGTTCTGAAGCCTCCATTATTGATGAAGCAGGTGGAAGTGCTCCTGAAAATCCTTCTTTGTTGACTAATGTTGTTGAAGAAACATATGTAGATCGCAAGGATATGTTAAAATCAAGAAAGGAGAAGAAAAAACAATCACGAAAAGAAACAAATTCGACTTCAAGCGACATCACAGTTGACGTAACCCTGGACGAATTGCAAAATGATGTCATACAGGAAAGCAGTGCCCCAATCCTCACACCCGAAAGCCTTTCAAGGCTTCCAGTTGAGAGATCGAACAGTGATGAGGCTAGCCTCGGATGCGATGCGAAGTTACGGTCGATTTTAAAGAGATCACAGAGCGAATCAGCTAATGGTATTTGCGGTGACAAGCTTTGTGGTGAGGACAATCCAAATGATTTATTTTCGCCTTCGCCGAGCACGAGAGTTAGATCGCAGAGTTTAAATGCGAACGCAATGTCCCGTCCTCGAGAGCAAGTCGGCCGGTATCGTAACAAATCAGTGTCTTTCGATCCGGAACCAAAGGTCTGCGAATTTGTGGAATATTCCAAGAAGCAATTGAAGAAAATGCGAAAACAAGAGCGAAAGCAGACCGAGATTGCGGCGAAAAAAATCGAGGCTGCGGCAAAGAAAGCCGCAGGGAAAAACAAAGGTGATAATGATATGttgtattgttttttatttgctattttgacGCAAAGCACACAGTCGCGATATGTTGTTTAG

Transcript

BRAKERKYLT00000008987

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4J4Y2	Protein kintoun OS=Drosophila grimshawi OX=7222 GN=Nop17l PE=3 SV=1
Q9NVR5	Protein kintoun OS=Homo sapiens OX=9606 GN=DNAAF2 PE=1 SV=2
Q5FVL7	Protein kintoun OS=Rattus norvegicus OX=10116 GN=Dnaaf2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004786 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04969 all species →	CS	CS domain	Domain	Interproscan
PF18201 all species →	PIH1_CS	PIH1 CS-like domain	Domain	Interproscan
PF08190 all species →	PIH1	PIH1 N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007052 all species →	Domain	CS domain	Interproscan
IPR041442 all species →	Domain	PIH1D1/2/3, CS-like domain	Interproscan
IPR034727 all species →	Family	Kintoun	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR050734 all species →	Family	PIH1 family, Kintoun subfamily	Interproscan
IPR012981 all species →	Domain	PIH1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22997 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0070286 all species →	Biological Process	axonemal dynein complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19751	DNAAF2, KTU, PF13; dynein axonemal assembly factor 2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.