Detailed information of BRAKERKYLP00000009170.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAH1253192.1, TCEA2 [Branchiostoma lanceolatum]
Species abbreviation MPAPU · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q29RL9Transcription elongation factor A protein 1 OS=Bos taurus OX=9913 GN=TCEA1 PE=2 SV=1
Q4KLL0Transcription elongation factor A protein 1 OS=Rattus norvegicus OX=10116 GN=Tcea1 PE=1 SV=1
P10711Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006396 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08711
all species →
Med26TFIIS helical bundle-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035441
all species →
Homologous_superfamilyTFIIS/LEDGF domain superfamilyInterproscan
IPR017923
all species →
DomainTranscription factor IIS, N-terminalInterproscan
IPR003618
all species →
DomainTranscription elongation factor S-II, central domainInterproscan
IPR003617
all species →
DomainTranscription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11477
all species →
TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000009170.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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