Gene detail

Detailed information of BRAKERKYLP00000010120.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAB4040640.1, 28S ribosomal S11, mitochondrial, partial [Paramuricea clavata]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9A8T0	Small ribosomal subunit protein uS11 OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=rpsK PE=3 SV=1
B8H4F7	Small ribosomal subunit protein uS11 OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=rpsK PE=3 SV=1
B0T2E5	Small ribosomal subunit protein uS11 OS=Caulobacter sp. (strain K31) OX=366602 GN=rpsK PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005576 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00411 all species →	Ribosomal_S11	Ribosomal protein S11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018102 all species →	Conserved_site	Small ribosomal subunit protein uS11, conserved site	Interproscan
IPR001971 all species →	Family	Small ribosomal subunit protein uS11	Interproscan
IPR036967 all species →	Homologous_superfamily	Small ribosomal subunit protein uS11 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11759 all species →	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0032543 all species →	Biological Process	mitochondrial translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02948	RP-S11, MRPS11, rpsK; small subunit ribosomal protein S11	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.