Gene detail

Detailed information of BRAKERKYLP00000010650.1 in Mastigias papua

Genomic Location: :...
NR annotation: XP_037563218.1, ubiquitin-associated protein 1 [Dermacentor silvarum]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000010650

ATGGTGAAGATAAGTGACAAATTTAGACCACCAAAGAAGGTGTCCTTGCCTGCCGGATGGCAACCCGTGGAATTTGACTTTACATTTGAAGAAAAAGTCATTATGATGGCTGATCAAGAAAAATTGCAACAAGAACGAGAGAGTGAGAACTTGAAAGTAGCTGAACTGATACAGGAAACACAATGCGAGCAATTGCTAAATGAAGATACCAGTAATGATCTTGTTGCGGATATTGGTGATATTGGTTCGGGAGGTGTCACACAGGCCTTGAAAACTGAAACAGTGAGTGACATAAGAGAGGCACCGATTCTGGAACCTGTGAGAATACAACAAGATGTTGTTATTGCAAAGAGAGATATCAATAAACAGAAGGATTTTAATTTCTCTGAATTTGAGGACAACTCTGCGACGCCGTTTGAACTTGTTGAATTGCAGACACTGGACGATATTGATGAGTTAAAAAGTGTACTGCAACCACAATGTCCTACAAATACTAAATCGACTGGTTCCGAGCGAAATGTGCCCAGTAGAAAAGCTGATGATGACATAGATTTCTCAATATTCTGTACCCCTGTGACTGCGAGTGTGGTAGAAACGAGTACTAACAGTCCGGTGGCAACTGCTTCGTTATTAGAAGGTTTGGAAGCAGAAGATTCTCATTTCTCTCAGAATGCAGTATCGCACGACGTCGTTTATCAGAATACACCACATAACACTATGAGTTGGAGTAACTCAGGATTACTACCAGCACGGTCAAACCATACTTACAACGAAAGTTCTGTGAATAGCACAGCAACATCGGGTAGCTCTGCCATACCTTTAGAAGGACGCTTTGAACGCAATAGTTTCCGGTTAGCAAATAGCAGATCAAGCTACTCGAATAGGTTTAGTGGGACGATCAATTCGGCAGCTCAGATATCACCTACTATCGCCTCTGTATACCCAGTTCAAGCTCCTTCGCAATCGGGATTGCCTGTAATGCAAAATAGTAGTTTTCCTGCGCAGCAGTATCAATCGCAAACCAGATGGAAGTCGCAAGAGAAATTGGCCGCATTAGAATGGGGTAGTAACGATGTAGATCCTGTATGCAATAACTCTGAagtttcttttatcaaatcaaCACAGACTGCTGACCAGAAGGCTTTGCATGAATACGAGACAAACAGTTTTGGCTTTGAAAAAACCAGTCTAAATAGAGCGAGCTCAAAATCATTGCCTAACCTTGCGGAAGCCTCGCTAATGACAAATGATGATCCACAGACCTGGAACCAATGGAAGGAAAACCAAAGAAAGTCGCCCATCGATTTTGCAACTCCAGTTGTGTCTACTTCAAGAATAGATAACATAATGAAACAGTTCCAATTAGACAGGCTTAGAGAATTCGATGAAACTTCAAATAGGGGTACAGGCACACATAGTGACCAGATGTCTGTACAGGATAGTATAGTTGATGAGCTAGGTACCAGACCACTGTCACGCCATGGAACCTTACCGCCTCTTCAGACACCGCCTCTTCAGACTTCGCCACATAGTGTTCCTTATCATCCCTCCACAAGCCCTCATCTAGGGAATAACTTTCGTACGCAAAACACAGGAAGTGACAAGCAATACCTTAGTGATGACGAAAGTAGCAGAGGTTTTCGGCATCTTGAGCAGGGATCGAATCGAGAAAGGAATCTCAGCCTATCTGAGCCTCTTCCAGCAATTACAACACAAACCCCATCAACATCACAATGGAAGAATCCCGTGCCAAAACAGGAACCATCAAAGCAGGGAACAGGGAGCTGGTTACCAGACCCCTTTACCAGTCTCTCAACAACTGAAAAGACATTTGTAACGATGGTCGCCGGGATGGGTTTTCCTAAAGCACGGGCAGCCAGAGCGGTATTGAGgctgaaaaatgatgaaaaagagATAATTGACTTCCTCGTTCGAGTGCAGCAGATTGCTGAACTGGGCTTTGACGAAGATGATGCTGAATTGGCACTAATAGAtaacaaaaatgataaagagaAGGCTTTGAATTATCTGAACCTAGTAAACAAATGGAAAGAGTTAGGATTTCCTGTTCAAAAAATCCACAAGGCTATGACACACACTGATCGAGAAAACGAGGCAGTTTTTGAGTATTTGACAACTTAA

Transcript

BRAKERKYLT00000010650

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBA

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00627	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038870	Family	Ubiquitin-associated protein 1	Interproscan
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR042575	Homologous_superfamily	Ubiquitin-associated protein 1, C-terminal	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15960	LD44032P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000813	Cellular Component	ESCRT I complex	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043162	Biological Process	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24629	UBAP1; ubiquitin-associated protein 1	-	Membrane trafficking	ko04131	deepkoala