Detailed information of BRAKERKYLP00000012323.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: BAH58090.1, LIM domain binding protein isoform 3 [Nematostella vectensis]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43679LIM domain-binding protein 2 OS=Homo sapiens OX=9606 GN=LDB2 PE=1 SV=1
Q6NVL6LIM domain-binding protein 1 OS=Xenopus tropicalis OX=8364 GN=ldb1 PE=2 SV=1
P70060LIM domain-binding protein 1 OS=Xenopus laevis OX=8355 GN=ldb1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001819 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01803
all species →		LIM_bindLIM-domain binding proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029005
all species →		FamilyLIM-domain binding protein/SEUSSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10378
all species →		LIM DOMAIN-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005667
all species →		Cellular Componenttranscription regulator complexInterproscan
GO:0007399
all species →		Biological Processnervous system developmentInterproscan
GO:0030274
all species →		Molecular FunctionLIM domain bindingInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERKYLP00000012323.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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