Gene detail

Detailed information of BRAKERKYLP00000012362.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: KAJ7336559.1, hypothetical protein OS493_011773 [Desmophyllum pertusum]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000012362

ATGATTATCTTAGGCCAGGCTGGAGAAATTGCACCCACCCCAGCTGTCTTCTTGAATGTGTATGGAATGCTCAATGGCCTGGTGGCTGGGATGGGCAGCGGGAAAATCTGGCAGCCAATAGACTCATTCAACAACACAATCAAAAGGACCTTTGTTGCCAAGTCTGGGTCAGCTTTAGTTCTTTTTTGCAGTGACAAACATCTGGATGAGGAGGGATTTAACATCTCGTACAGcATTAGCAACTGCAGTAATGAAACATGCTCAGGACGAGGCTATTGCAGTGAATTCAACTCTTGTGAGTGCGACAAGGGATGGACTGGTAGGCACTGTGAGTTAAGACAGTGCTGCCCTCAGGAGTTATACAACTTAGTATCGATGACATACAGATGCCCTAAAACTTTGTTTGGAAATGAATGCCCAACTCTAGTTGCTGGAAGAGCATCGCATGCTACTGTTGTCCAGGACAACACCATTTGGATTTATGGTGGCTAcagttttgcaaaaatttctaaTAATCTTGTAAGGTACAACATAGTTACCAAAAGATGGACCGTAGCTGATCCAAATCCTAATCCAAAAGGCAGATTTGGACATAGCATGATTTTTTATAATAAAAAACTTTATGTTTATGGTGGAATTAAAGTGGGAGGCATAATCACAAACGACCTTTGGGAATTCGATACTCAGACAAAAATTTGGCAGCTGGTCACTGTCAAAGGAGATTCCCCTATCGCAGTAACTGGCCATGCATCCGTGGTTGTTTTGAATCAAATGTACGTCATCATGGGGTATTCTGCTCAAAGGAGTTTTTGTGAATGCATTCAGCAGTTGGATTTAGGAACAATGGAGTGGAAGCTAGTTACAGCAAAAGGTGCGCTAGTAACAGGGACATTTGGACATAGTGCCGTTTACGACCGTGCAACGGATCTCATATTTGTCTATGGTGGATATTCTTTGATAGTGGATTCAACCTCACGAAGGCAGCAAGCTTCAAGCGCATTGTTCTCATTCAACCCAAATACAAAATATTGGAATGTACTCCCCAGCTCAAATCAGCCCCGTATGCTTCACTCGTCAGTGATCATTGGCAGGATGCTCGTTATATACGGGGGTTCCAATCATCATCACTTGAAGATAGAAGAGGCTGATAAAAAATGCTATTCTCACGATATACTTGTCTACAATATTGATTGCAATAGTTGGAGAACAGCGGTCTCTTCTCACCTTTTCAATACAATGGGGAGATTTAGCCATACAGCTGTCCATTACAACAGGACTATGTATGTTTTCGGTGGCTTCAATGGAGTCCCACTTAATGATATGGTACCTATAACGATTGGTGAGTTGATACTTGTTgTGAAAGCAATAGCAGATGTCGGCTTGTGTCCATCCTCGATTAAGTTCACCTGTTCCTCGCTTTCAACTTGCTATAGTTGTGAGCTCCATCCGAATTGCACGTGGTATAATTCGAAGAACATTTGGTCATGTAGAGTTGCAGAGTCAAAGGCCGTTGTTGCCCCATTAGAACGTTGCGAGTCGCGTGATATTCAAGAGCCCCGATGCCATCTCATTCAGAACTGCTCTAGTTGTACAGCTGCCCATTCAGTGGGTTGTATGTGGTGTGAGTCGCAGAATCAATGCATTGATAAAGATGCGTACTTTATCAATTTTCCATTTGGCCAATGCCTTGAATGGCTAGATAGTGCGACGTGCCCAGATGTGAAATGCAGTGGTAAGAATACGTGCCAGAGCTGCTTTGAACTGCCTGGTTGTGGATGGTGTGCTGATTCGAGGGGCACGGGCATCGGTGTTTGCATGGGCGGCACGAACCATGGTGCACTTAGTGCAGTGTGTCCTGCATCGAGGTGGCACTACATTGAATGTCCAAGTTGCCAATGCAATGGACACAGTTTGTGTGCAAATATGTCGTCGTGCATCAAGTGTGAGAACAATACAATAGGAGAGCATTGCGAAAAATGCAGGCCGGGATATTATGGAGAGGCCCGTTACAATGGCACATGCAGAAAGTGTTATTGCAATAACCATGGTCTCAGCTGCGATAGTTTCTCTGGAAAGTGTGATTGCGATACAAAGGGTCTCATTGGAGATCATTGTCAAAGTTGTGACTATCGAGAATTTGTTGGAAACGCATCAAATGGTGGTCACTGTTTTTatgaaCTGAAGTTTGGATATGGGTACAAGTACAATAGAACTAGCAAAAACCTAAACTTTTTTGCAATACCAGTGCAGCTCCCAGCTGTTCCCTTCTCTGTTGCCTTCGATAATTTTGATGAAGTTATGAAACTTTCTTTGCAGACTGGCAAGGCAATGAAATTCAAGATTGCTGTCAGAGTTGGCGACCGAGCCTATATGAATCTCTCATACACCATGGGTGGCGTTGAACGATTCATCCAAAAGCGGTTCCTTCTTGGCGCGTACGGGAAAACATTTGACCCTGAAATCTACAAAGTTTCACCCAACAGGGAGCCGATATTCAAAGtgtatatttataatatcagTAGGAATTGTGGTTTTGAGCGTCGTCGTGTTGAACTTCATGAAATGGCAAGCAGACCTTTTGCCACAGTCAAAATATATTGTGATGATGGTGCAAGGCCACTTCGAAAGGCTGATCCATCACAGATAGGCCTAGAGCCATTCGCCCATAGCCATTTTGCAGTCGCATCTATACTTATCGAACTGCCTCGTTCCGAGAAAGGCTATTCACCAAAAGGACAGAGTGGACTCTGTATAGGTAGTACTGTTATACAGCATAAACCTCCGAACCCTCTTACCAATGCTCAACATCAGCTTTGCCTGTTCAAAGACAGACAGAAACGTCGTCGAAACTTTCCAGTCGATGTCTAG

Transcript

BRAKERKYLT00000012362

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6A051	Attractin-like protein 1 OS=Mus musculus OX=10090 GN=Atrnl1 PE=1 SV=2
Q5VV63	Attractin-like protein 1 OS=Homo sapiens OX=9606 GN=ATRNL1 PE=1 SV=2
Q9WU60	Attractin OS=Mus musculus OX=10090 GN=Atrn PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002032 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13415 all species →	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF13964 all species →	Kelch_6	Kelch motif	Repeat	Interproscan
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan
PF01437 all species →	PSI	Plexin repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR002049 all species →	Domain	Laminin-type EGF domain	Interproscan
IPR051568 all species →	Family	LZTR1/Attractin	Interproscan
IPR016201 all species →	Domain	PSI domain	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR002165 all species →	Repeat	Plexin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46376 all species →	LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000012362.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.