Gene detail

Detailed information of BRAKERKYLP00000012648.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAH3021478.1, unnamed protein product [Porites evermanni]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P33731	Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=SRP72 PE=1 SV=3
O76094	Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 SV=3
P49965	Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP72 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005828 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17004 all species →	SRP_TPR_like	Putative TPR-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR026270 all species →	Family	Signal recognition particle, SRP72 subunit	Interproscan
IPR031545 all species →	Repeat	Signal recognition particle subunit SRP72, TPR-like repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14094 all species →	SIGNAL RECOGNITION PARTICLE 72	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006614 all species →	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0005786 all species →	Cellular Component	signal recognition particle, endoplasmic reticulum targeting	Interproscan
GO:0008312 all species →	Molecular Function	7S RNA binding	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000012648.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.