Genomic Location: not available for this species
NR annotation: KAJ7374681.1, hypothetical protein OS493_005023 [Desmophyllum pertusum]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000012660 |
| Transcript |
| BRAKERKYLT00000012660 |
| Protein |
| BRAKERKYLP00000012660.1 |
| UniProt accession | Description |
|---|---|
| A5GFY4 | Negative elongation factor D OS=Sus scrofa OX=9823 GN=NELFCD PE=3 SV=1 |
| Q8IXH7 | Negative elongation factor C/D OS=Homo sapiens OX=9606 GN=NELFCD PE=1 SV=2 |
| Q5RFA0 | Negative elongation factor D OS=Pongo abelii OX=9601 GN=NELFCD PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005020 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04858 all species → | TH1 | TH1 protein | Family | Interproscan |
| PF02931 all species → | Neur_chan_LBD | Neurotransmitter-gated ion-channel ligand binding domain | Family | Interproscan |
| PF02932 all species → | Neur_chan_memb | Neurotransmitter-gated ion-channel transmembrane region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038050 all species → | Homologous_superfamily | Neuronal acetylcholine receptor | Interproscan |
| IPR018000 all species → | Conserved_site | Neurotransmitter-gated ion-channel, conserved site | Interproscan |
| IPR006942 all species → | Family | TH1 protein | Interproscan |
| IPR036734 all species → | Homologous_superfamily | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Interproscan |
| IPR036719 all species → | Homologous_superfamily | Neurotransmitter-gated ion-channel transmembrane domain superfamily | Interproscan |
| IPR006201 all species → | Family | Neurotransmitter-gated ion-channel | Interproscan |
| IPR006202 all species → | Domain | Neurotransmitter-gated ion-channel ligand-binding domain | Interproscan |
| IPR006029 all species → | Domain | Neurotransmitter-gated ion-channel transmembrane domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12144 all species → | NEGATIVE ELONGATION FACTOR D | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0032021 all species → | Cellular Component | NELF complex | Interproscan |
| GO:0034244 all species → | Biological Process | negative regulation of transcription elongation by RNA polymerase II | Interproscan |
| GO:0045892 all species → | Biological Process | negative regulation of DNA-templated transcription | Interproscan |
| GO:0005230 all species → | Molecular Function | extracellular ligand-gated monoatomic ion channel activity | Interproscan |
| GO:0006811 all species → | Biological Process | monoatomic ion transport | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0004888 all species → | Molecular Function | transmembrane signaling receptor activity | Interproscan |
| GO:0005216 all species → | Molecular Function | monoatomic ion channel activity | Interproscan |
| GO:0034220 all species → | Biological Process | monoatomic ion transmembrane transport | Interproscan |
BRAKERKYLP00000012660.1.
