Gene detail

Detailed information of BRAKERKYLP00000012741.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_033633943.1, nascent polypeptide-associated complex subunit alpha, muscle-specific form-like isoform X3 [Asterias rubens]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000012741

atgtttaaaaagttAAAGTTCTTTTATAGAGTTCTATACCATGTTTTAAGATTTCTGAGACTGCTGCGATGGAAGAACAGTAATCAAGAACTTAAAAAGGACTCGCCAACAAAGTCATCAAGTTCACAGTCATCAGCTTCTTTTGAAATACATCGATCCTCATCAGATTTCTCAGCAACAACTGGAAGTGGCACAGATCAGCAGTCTTCGCATTCTGACATAAAAGGAAGTGCACTGATTGAACTACTTAACAACCGTGAATTGTCCCGTCAGACTTTACAATCAAGTGGAGGTAGCACCTCAATTGCAAATGAAAGTGTTGTTACTTTGACAGATAGTAAATATGGATCTTTTTCATCATGCTACCCATCAACAGTTGGTAGCAGCCTTGGCACAGTTGACTCCCCAAATGCACTGTCATCACCAGAGCAGTTGCTGGCTCCTTTCATAAGACCCACAAAGGTGGCAAAAGTTCAGAAGATCAGTGGCTTTTCTAGCAGTAGCACTTCTAGTGATAATGCGGAAGATGCATTGCCAAAGAGGAAATTACAGCTAAAAGCAACCAGTGATATATCAGTTTCATCTGGTGAAAGCCAAGACCCTTATTTTGAGCACAATCTCACTCCGTATGATTTGTCTTCAAGGGAAGTGACTCATTTAGAGCCTCCAGATTTGAGATCAACATCAGTTGAGGAATCTTTTTCATGCTTTCAACTAAGTGGAGAGAGTTACAAGCCAGTGTCATCCTCTTTCTCATTGCCGGATCCACTTCCAGCATCACCCTCAGACGCTCAGTTACCAGAGCCTTGTAGTGATGCTAGTGAACACCAGGTAGCCTGTCTGGAAGAAACAGAGAAGCAAAGTGTGGATGATGAAAAGCGTGCACTTGATTCTTTACCTAAATGGGTGAAATGTGAGAGAAAGAAGCAAATCGGTACTATAAGTTTCAGTGATGGTACAGACTCCAACATATCTTCACACTCTGGAGCTAGTTCACCATTTTGTGGAGTAGTGTTACCTGATGGCCAATGTGGATCTGTTGCCCTAGGGAGCCCAAGACCCAGCATATCAGAGCCACAAAATCTTCCTTCAGCTCACTCTCAAGATATCTATTTACAATCTGTTAATGAAGAAGAAAACTATGAAGAAAGCTGTGTATATCCAATACAGGATTGTCCAAAGAAAGCAAAGTATAGAGACACTGATTCACTTGATGTTATTGTAGAAGCTAGCAGCACCCCCTGTGGAAACAGTGGCAGCAAGGATGAACTAGATGTATCATCACCAGGTATTATTCTACCTTCACAGTCATCTGCGCTGTCAATTAATTCAAAGCCTGTTCAGAAGATATCTTCAATGTTGTATGAGAAGCCATCTGATAAGCTCTCTCCAGTACTAGATGAGCCTAATGTCTCTCAAATGCAAATTGGTGGTGCTAATGGCACTGGAGGGAAAGATGTCGAGTTGAAATGGAGTGAAGATGGCTCTCTGTCAAAAGATCCTGGTGTGGAAACACTGCAGAATGATTTCAATCATGATCAGCCAGCAGTGGACAAAAGTGAGAATGCACATGACGAACTAGAGATGTCACAGGATTTGTTCAATGAAAAGGTTGATCAAATCGATACAGCTGAAACTGATCCGAATTTGGGCGTAATAGAGGCTGGTTTGGAAGACAGAAATCAAGAGTTTAGTTTGTTTTTAAGTCAGACTCAGAATGAGCCCAGTCAACCGTTGAAATTTCAAGCCACGAGCAAAACTCCACTCTCTGAAAGTACGAGTTTCAATCCAGCAGATGCCAAATCGTTTTCAGTTACACCCGGCCCTGCCGGAGGTAAAGAGGAGCTGCAGGGGGTTGGGCGCCAAAGTAGCTTTGAGAATACGATAACCACGCCTAGCCAATCAATTCTCCCGAGCGACCAGAAACCTGAACCGCCAGCCGTCATTAGGACCTCAGTTGAAACCGAACCAGACGCAAACGAGGCAAAAGGCTTGGAAATCCCAAGTGATGTACTCAACAAAGTAAGCTCAAATGAAATGTCGTTTTCCAATCTCGCTCATATATCACCGCCCTCTGATGGTGCATCGTTTCTTCCTGTCAAAACACTCACTCCTCCTTTGAGAAATGTTGATATAGAGATTGACTCGAACCAGGAGATTGGTGAATCggtgaaagaaaagaaactcGATGTTTCTCATGGGAAAGACTTTGTGTCACCTTCGTATCCAACAAAGGACCCACACCCAAAGGTAACAGTATCCTTCAAGAGTCGGGAGACGAAAGGAGCCGTGGACAGCGATGAGATGTCTGCTATACCTAAAATTACTGGACTCCTAACTGGTGATATTCATGTTGAAACGGCGAATGACTTCTCTACCGAGCAGAATCCTACAATTTATTCCAAAGCCTTAAAGACATCAGTGAATGTAAATACACGTGGCCTTACTACATctaatattgaaaatgatccCTTTGCTTTCCaagaggaagaaaaagaagATGCTCCATTTGAAAAGCATCAAATCGCAGCGGTAGAATCATCCACAAACTTACCTCCAAAACCGATGCAGCCCGCAGAGAATCTTACACAGTGGGACGCAGATTCCTTGTGTAGAGTAGTAAGTCGTATAATAACAGTTAAGGAGGAGACGACTGTTTTCACTAGGAAGTTTATCACGGAGATCTATAGAATGGATGGTTCTGTCTTACGTAAGACAGAATTTTTTGAAAAGGGATCTCCTGTGAAAACAGTGACAGAGAAGACGGACCTTCCCACTGTTCAAGTTGTTCCGCTGGAAAATGTAGAGTCGCAAATGGATGAGGAGAAAGTTACAGGTAACAGGACTGCAAAAAGCCAAGTATCTACAAGGTCTGGCCAAAAGTCGCTTGGAGACAAATCCAGCCATAAACGAAGAAGATCGAGCTCAACTCCACCAAGCAGCTCCACAGGAGTCCCGAAGCGTCGTAGGGCGCAACAGGAGTTTACCACGGACGAATTTCATCCCGATGAGCCTGTTGGCTTCTTTCCTGCAGCAGATGATCTGGGGAATAATACCAGATCGAAGAAGAAGCAAGCACGACGGAAAAAAGACACCGAACTCAGTGATTCCTCTATATTTGTTGGAATGAATTGTTTTGGAAAATGGTTGGATAATCGCTACTATCCAGGGAAAATAGTTGAAGTCACAAGTTCGGGAAGttacaagacaaaattccaTGATGATAAGGAGCTTCAGTTACGAGCAAACTCCATAATCCCACAATATTTGATTCAGGCTGGCCAGTCAGTTTTTGCTCGTAATAGTAGTGACGGGTTTTATTATCGAGGTATCATAAGTAGAATCAACAGAAAAAGGGATGGTACGCATTCAACTTACCATATCAAATTAAAAGACACTTCTACCACGAAGAGTTTCGATGTTGATGATGTTATGTTGGATGCCAGACAGAAATCGCAAATAAAAAGCATAATTGAGGGAGCTGGCACGAAGGACGATACTACGGCTCAGTCAACTCCGCATGctAAAGCAATAGACAATGTAGCGGGACCGCAGACAGTCGGTGGAGAGCCAGCTGAAACTCTACGAAAACAGAAGGAAACTGTCGGTAGTAAGAGAAGGCGTTTCTATGAAATGGAACAGCGGAGAGAAGATTCGATTCATCTCATGGTCTCTAGTTCTAGTCCAGAAATTGATTCAGTTCAATTTCGAGTGCGTCCAAAGAGGAGAAAATACGAACCGTCCTCTGATCAACAAGCATCAACTTCAAGCAATACGCAAAAGCATTTTAAAGTTAGGCAAATCAAAGACCCTGTGGAAAAAATGAGAGAAAGATGGAAACGAATCGAGCATTTAAAAAACGATCCTAAATGCGAAGAGAAACTACGTCTCTACGGTTCGTTACCCGAGGATCCGACTTTATTCAAAGGATATGTCTTCCTTATTACATTTAATACCAAGTCTGATCTTATTGCAGTCCAGTCAAAGTCAGATGTGGATGAGGATATAGCTTTCAGATGCAGAAACTTTAAGCGTTCTCATTTGGCGTGTCAGGTAACTGCAGGTGGTGGAAATGTCGCTGATTCAGTGAGAAACATTAAAGACGTTCCTGACAAGACATTTGTTCTCATCGCACCAACACACCAGAAAACCCTCAAGtacTATTTTGCATTGTGCTATGGTTTCCCTTGTGTAAGTCACTTCTGGATAATAGACTGTTGCAAAGAAAATCGACTACTGCCCTTTGAAGATTATTTACTGGAAGCTGGGATCGACCTGATAACTAGAGAGATTGTTCCTGCTCACAAGCGAATACAGCCTCTTCTTGGATTGAAGATTTATTTAAAGGCACTTGATGAAAACAGAGAAGAGTATTCACTGGCTGTGAAGTTTTCAGGAGCCAAAATTGTACCAGAATTACCAAACGTAAAGACGTTCTGTACAGGTGATGTTAATTTTATTCTGTTGGGGGACAATATCGTGCCAAACAAAGGTCTGATGTCTCTTTCAAAAAGGCTTGGTGTTCCTTGTGTGACGCTAGAATGGTTTCGCCAATGTGTTGTACTTGGAGAATTTATTCATCCCGAGTCGAGTGACTTGTTCATTGCTAGGAACCCATGA

Transcript

BRAKERKYLT00000012741

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006394 (this species only)

Pfam domain

No Pfam domain signature was detected for BRAKERKYLP00000012741.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR047252 all species →	Family	TP53-binding protein 1-like	Interproscan
IPR002999 all species →	Domain	Tudor domain	Interproscan
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR047249 all species →	Domain	TP53-binding protein 1-like, first BRCT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15321 all species →	TUMOR SUPPRESSOR P53-BINDING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000077 all species →	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0042393 all species →	Molecular Function	histone binding	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20915	TP53BP1, P202; tumor suppressor p53-binding protein 1	-	NOD-like receptor signaling pathway	ko04621	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.