Gene detail

Detailed information of BRAKERKYLP00000012858.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_020610021.1, rho-related BTB domain-containing protein 2-like [Orbicella faveolata]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000012858

ATGGAGAGGAACAGAGATGCACGCGAAGGACAGGCTGTTATCGACGAAGCGTACGGAGACGAGTCACTTCACGAATACGTGAAGTGCGTTGTTATCGGTGATACAGCCGTAGGGAAAACACGACTAATTTGTTCTCATGTTTACGGCTACGATGGTATGCCTTTAGAGCTATTGACTAGTAAACCACACTTGCCTACAGTATTTGCTATCGATCAGTATATGTCAGAGCCAACTGTACGTGAGCGAGCAAGGTATGTTGTCGATGGCGTTCACGTAAGCCTGCGAATTTGGGATACATTTGGTGACCATGAAAAGAATCGAAAATTTGCCTACCAGCATGCCCACGTTGTTGTTATGTGTTTTTCGATCGGTATGCCAGCTTCTTTAAAAAACATCAATGCAAAATGGTTTTTGGAAATCAGGAAATTTTGTCCGAGAGTCCCGATTATTCTCGTGGGAACCCAGCTTGATCGTAGGCACACATCTTCCAACAGATTCAGACGTGTGGGCCATGCCCGACTAAGGTCGTACCTTGCTGGTTACCACGAAGTCACTACAAGCCAACTGCCTCTTGTCCCGCCTGAAATTGGGCGACAGACTGCACGCGATATTGGAGCGTTTGGTTACTATGAAAGCAGTATTGTTACAAAGCATGGTGTTGATGACATTTTTGTAAATGCCATTAGAGCAGCCTTAATTGGAAGGCGAAAATCAAGACCAATGTTATCGTCACATCTTAAAAGGGTAGAGCACCCCTTTTTACAAGAGCCCTACCTCCCTCCTAAGCCACCTGGTCCCACTGCTCATGTACCTGTTTCAACCTATTATGAGGAACAAGCATCACTTTATGGCAACACTGAGTTGGCTGATGTTTTGTTTCTGGTAGAAGGTGCTAATATATCTGGCCATGCTGTCATTCTAGCAGCGTCAAGTAGTACCTTTGCTACATTACTCTTAAACAAGGCACTACTTCAGTCTTTTAATAGTGAGCTTGACCATGTCATCTTACACCCAACACTCAGCAGTGCCAACCTAATTTTACAAGAGGGATTTGTGAATGGAGTGGCATGCCAACTCCCTCAAGGATTTGTGTCTATTGATACAATGCATGAGCATAATTTTTTTAATTGTAAAGTTATTGTTAAAGTCATTGGTATGTCTGCTGCTACATTTCAGAATGTTTTGGAATATCTCTATACTGGTGCAATCAAAGATCCTAGCTCTCTGTGTGATGTTTTAGCTGCAGGGACATTTTTGCAGATACCTACTTTGAAGGAGTATGCCAGTAATTTGCTTGCAGGAGCTGAGTATATGTCTTTAGAGTCATCAAGGCAGATGAGGATGCACTTCGTGACAGACTTATTTCGGTTATTCTTTAATAAGCAATTGTTTTCAGATGTGACATTTGTTATAGATGGCACAGCAATTCCAGCCCACAAAGCTGTACTGATACCACATTGCCAGATGATGGAAGGGATGTTTAGAAATGGCAATTTCAGAGAAAGTGGGACAGAAAATGTCAGCTTTAATGACACTAATGTTGGGAGCTTTCAAGCTATGCTTGAGTACATATATACAGGTAGCTGTTCAGCTATCCACCTGGCAGATGCGTTGGAAGTACTGAAGCTTGCAAATTTCTTATGTTTGCCAAGACTTGTGACGATTTGTGAACAATGTATTATCAAGGAAACAGATGCTTCATTAGAATACAACAGAGAAATGGTCATGGAAAACATATTTGAGGTCCTGAAAATTGCCCAGTTGCACAACGCTCCACAGCTGACTTCTTGGTGCATGTACTTTATGACGGTCAATTACAATGATGTTTGTGACAGGCACGGCAAAGAACTGAAGGAAGTGAACATGACAACGCTGAAGTATTTGGAAGAGAATCGTTGGCCTCCAGTTTGGTACCTCAAGGAGCATGACTCTTACATCAAGGCTTGTAGAGAGCTAGATACAGAAAAAGAGAAgaagatgaaagcaaaaaggaaGGCTAAGTGTCACTCTTGTTTTTAA

Transcript

BRAKERKYLT00000012858

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O94844	Rho-related BTB domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RHOBTB1 PE=1 SV=2
Q9DAK3	Rho-related BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rhobtb1 PE=1 SV=2
Q9BYZ6	Rho-related BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RHOBTB2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007917 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24413 all species →	SPECKLE-TYPE POZ PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030162 all species →	Biological Process	regulation of proteolysis	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000012858.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.