Gene detail

Detailed information of BRAKERKYLP00000012885.1 in Mastigias papua

Genomic Location: :...
NR annotation: RMX44083.1, hypothetical protein pdam_00015028 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000012885

ATGGGTCAAGGTATGTCCAAAGAAGCCAACGGCCCAATTCATGCGAGAGCACAAGCACCCTGGCAGAGTCTTGTCTCGTCATCCAGAACAAGCACAAGCAGCTATGATTCATGGGATAGCTATCCAGCTTTGATTCCAACTCATGGTTGCACTGAACTGAAACCCAAACAAGGGACAACTGTTGTGTCTAGGCTGTCACGTGCATTGGATTGCAGATTGGATGCATTGCAATCTATGGATATCAAGCCCATAAATACGGTGAAGCCTCTTGATGAACTTGTTAGCTGCACAAAATTCTCTCGTCAAGAGTTACAGCAGATGTACAGAGGATTCAAAAATGACTATCCATCTGGAGTTGTAAACCGAGAAGCGTTCAAGCAGCTTTATTCAAGTTTATTTCCAAAAGGAGATTGTACTTTGTATGCGAACTTCATATTTGACACGTTTGACACAAACAGCGATGGCAAGATCACTTTCGAGGACTTTGTCATTGGTTTATCAGAGTCAATACATGGCAATTTAGatgcaaaattgaaatctcTGTTCCGAATATACGATGTTCAAAGAGATGGAGTGCTAACCAGAGAGGAGCTGTCCACTGTGTTTATTGCATTCTACAAAATGACCGGACCAGACGTTATTGAAGGTTTTCATTCTACTTACGGTATTCAGCTTATGCAAGAACATGTTAACGAGCTCTTTCAGGCCCTTGATAGAAGTGGAGATGGATTTGTAACAGAAGAGAATTTCATAGAGTCCTGCTCATATGTAATTAATACTTTCATATACTATATAAGTAGCCTCTTCTTCGCTTGTGTGTTCTACGAGGCTGCTGCAAATGTCAAGTACCATCAGCTCCTTGAGGAATTTGCTATAAAAAAGCTCCCTGGATTTTACAGAAAATATGGCAGAGAGCATAGCAACTGTGATTATGGTTCTTTTAGTGCTCAATACAAGGACTCAGATCTTTTCCCACAAACATTGCCTATTGAGAGATTTCTTGATATCCCAGGAccaataagaaaaagaaagttCTTTGAGGACATCAGTGTTGGACACATTGTGGAGGGTATTGTCATTGATAAATGGGCTGATACACTTCATGTTAGACTTCATTCAGTATATTATGGCCCAAAGCGGTGGATCAATGATTTAAGAATCAAGGGTGAGTGTGACTTGTCAGAATTCAAAACACATTCTGGATCTAGACGTCTAAGCGATTCTATCTCAGATTTTGACATTGGAGATCATGTGAGAGGTGTTATCAGCTTTGTTGATAGAAAGGATTGGAAGCTGGCAATTTCCTTCAGGAGATCACTGCTACCGGATTGCTTAAGTCACACAGAGCTGGGTGCAGTTGAGGAAGAAAGAAATTTGATGTTGGATGAAGATgttaataatgatgatgatgatagcaaaGGATATTTGTGTCACTTGCGAAATTTACCTTGTTTTCAAAACCCGGGTTTAACGAATAACTTATTGCGGCATCTTGGTATTGACATTGAAAGGCCTTGCACATTCCTGGATTCACTGACATCTGAAGTCGATCCAAGTGAATATGGTGAAAAACTAAGGGAAAGACAATCGACAAAATGGTCATTAGACATGGTTGCAAATGGAGTAAAGTTATTTAAAGAAAGTAGACATGAAgaagcattaaagtgctttgaTCAAGCTCTTCAGATGCATCCAAAAAATGCCGAAGCATTAGTGGCTAGAGGAGCTTTAAATGCAAATCAGAACTTATTGAAGTCTGCTATTGCGGACTTTCGTGAGGCACTTGAAATCCATCCATCTCATCGAAATGGTCGCAAGTATCTTTGCGAAACTTTAATGACAGTTGCCAAACAGTACGAAAAAGATCGCTTGTGGAAAGAAGCTTCTCGCTGCTATAAAGAGGCTCTTGAGATCAAACCGGATCATGAAGATGCGAGGGAGAGAATTCATCAGATACGAATCATGTTGTCGCAACAGGTTTTAGCGGGCAAACGGAAAACCATTCCTGATCAAGGTAATACCGTTAGGACTGTGAGTACAGCCGCGGGAAGCGAGTCATCACAAAAATCGAAATCTTTGATTGAATTGCTGAAGAAGAAAGTGTCGAAAAAAGGCAAGAAAAAAAAGCGAAAGAAGCCGAAGCCCAGAAAAAGAGCGAAGAAACGAAAATCACACCGCTCTGATTCTTCATCGATTGATTCCCATGATGATTCTGAGGTGACCGAGTCTGCTTCCGAACATCCGACAAGTGAAAGCGACGACGAATGGGTAGAGAAGACTGTGGACGATAAAATACCCGATGTACAGACACGGGATTCTTACAGCCAATTGCACTCAAGAAAAGGCAGTTTAGACAAACAACGAAGAGAGTCCGTTGATTCAGAAGCATCGGTTCGGGCCTACAGTGCCGGAAGTGAGAAGGAAGAGGCATCTTGTAGATACAGACAAGCATCAAGGCCTTTGGAAAAACTTGAAAAGGACAGCAGCAACGATGCAAAAATACCTTGGCATAGAGATACTGAAAAGCGAAAAGAATATGAGAAAATGTCAAATAAAAGAAGCAAAGATGAAAAGAGGCATGGACGAGATGTTAGAAGGAAAAGAGAGGAAAGAGAACGAAAGCTGGGGAATGGCAGGGGTTCATTAGAGTACTCAAAGGATGATGTGAAGAGAAATCACCCAACCGAGAAAATGGAAACCATGACGACAAGTGTTGCACCCTGTAGCAGTTTGTCAGGCGATAATTTTTCTCATACCCATTTTTCAAATGATGAAATTAGTTTTATTAATTCCTTGTTTCGCAAAAACTCCCATAAATGA

Transcript

BRAKERKYLT00000012885

Protein

Uniprot

Uniprot term	Description
Q17QD9	Calsenilin OS=Bos taurus OX=9913 GN=KCNIP3 PE=2 SV=1
Q9QXT8	Calsenilin OS=Mus musculus OX=10090 GN=Kcnip3 PE=1 SV=2
Q9JM47	Calsenilin OS=Rattus norvegicus OX=10116 GN=Kcnip3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13432	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan
PF13833	EF-hand_8	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR039190	Family	Tetratricopeptide repeat protein 14	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR003029	Domain	S1 domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23184	TETRATRICOPEPTIDE REPEAT PROTEIN 14	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan