Gene detail

Detailed information of BRAKERKYLP00000012913.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_013392352.1, mediator of RNA polymerase II transcription subunit 15 isoform X2 [Lingula anatina]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NS15	Mediator of RNA polymerase II transcription subunit 15 OS=Xenopus laevis OX=8355 GN=med15 PE=1 SV=1
Q924H2	Mediator of RNA polymerase II transcription subunit 15 OS=Mus musculus OX=10090 GN=Med15 PE=1 SV=3
Q96RN5	Mediator of RNA polymerase II transcription subunit 15 OS=Homo sapiens OX=9606 GN=MED15 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002801 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09606 all species →	Med15	ARC105/Med15 mediator subunit N-terminal KIX domain	Domain	Interproscan
PF21538 all species →	Med15_M	ARC105/Med15 mediator subunit central domain	Domain	Interproscan
PF21539 all species →	Med15_C	ARC105/Med15 mediator subunit C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036529 all species →	Homologous_superfamily	Coactivator CBP, KIX domain superfamily	Interproscan
IPR019087 all species →	Domain	Mediator of RNA polymerase II transcription subunit 15, N-terminal	Interproscan
IPR048385 all species →	Domain	ARC105/Med15 mediator subunit, central domain	Interproscan
IPR048386 all species →	Domain	ARC105/Med15 mediator subunit, C-terminal domain	Interproscan

PANTHER

No PANTHER signature was detected for BRAKERKYLP00000012913.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000012913.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.