Gene detail

Detailed information of BRAKERKYLP00000013108.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: NWQ63807.1, PRD14 protein [Neopipo cinnamomea]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000013108

atgaaGGCTGTATCTTCCTTCGATCATGAAGAATCGGAGCTCAAGTTAGACCAGAAGGTGGAGACTGTCGGTGACTTTACAGTTACCATTCAGGAAAAATGCCCTGACAGAAAGAAAGTTGCTTCCCTCATTACTTTCCATGATATTGGATTGAATCATAATAGTTTTAAAGAGTTTTTTCATCATGAAGATAACTTACAACTTTGGGATAAATTCAAGATATATCATATTGATGCACCGGGACAACAACAAGGGGCTGAAAAGTTTTCATCACAGTACCAGTTTCCTAGTTTGCAGAATATGGCTAAGATGTTGGTCACAGTTTTGGAGCATTATAAGTTAACAAATGATGTAGTTTGCTTTGGAGTTGGCGCTGGTGCAAATGTCTTAATTCACCTAGCCATGGAGAAGCCTCATTGGATCACTGGACTTGTATTGGTTGACCCTGCTGCAAGAAGTGCAGGATTTAGAGAATGGGGCGAAGAAAAACTTGCTTCATGGCAATTAGAGACGAAGGGGTTTACCAGTTCTACGGAAAAGTTCCTGATCTGGCATCATTTTGGAAACAAAGCAAAGAGAGTGAACATGGAGAAGGTAGATCAGTACATCAGGGAAGTTGCCAACAATCAAAATGCACACAATATGGCGAAGTTCGTGAAATCTTACATGAACTGTCACGTATTGATCATCACAAGTGACATGTCACCATACAAAGAAGAGGCGAATCGGTTGTTCTCTGCATTGCCAAAGGAGAAAGCTAACATAATGGAGGCCTCCAACACTGTAAACGTGTTCTTTGAAGATCCCAGCCGATGTGGAGAAGGAATGTTGTTGCTGATGCAAGGTTGCCatcttgGGACGGTCCCGGTGTTTGATCGATTTGCACCAAGGGAATTCCGTCATGTTCTGCAAGGGATTGTTGACAATCTGTGGTTGTGCTTAGTGTTTTCTGTGAATCGCGGAAAGGGACGAAGAAAGTCAATCAAAGCAGAGCTAGCGAAGAGAAGGTCTATTAGTTCCATGGATATGGAACCTGAAGAACAAGACCAGCCGCCAAATCACAGAAGAGTGTATTCCTTTACTCAGGCTGATGTCGACGCGGTATTGTACGGTTATCTGCGGGCACACACTGACCCAGACATGCCGTTGCATTCCATTTCTGGAATAAAGTTCATTCCTTATCAGTATCCTCAAGGGATGCATGGCTTACTAACACCAGTCAGCCCGATCCATCAATTTTCACCATGGTCTCAGTCTGATGAGAAAACGCAGACATTTTTTCCCTCATCAGCAACAAGCGCAATGGAATCCCCATCTTTCGTTACAATAAGACACTTGCAGATTGGAAATTTGTTTCATGTCGGGGTATTCTCTACTGACTTCATCCTACAAGGTACACGTCTGGGTCCTTTTGTCGGCAAGAGTCTTCAAATTGATGAGATTGACAGATCAATGGACAATTCAAACATTTGGGAGATATGCTCAAAAGACAAGGTCGTAAAGTTCATCGATGGCACATCTGAGCCAAAGAACTGGCTGAAAATTATCAATTGTGCGAGATACAAGAAAGAGCAGAACTTAGTTGTCTTGCAAGTTGACCACGAGATCTTCTATGAAACGATGAGAGATATCACTCCTGGTGAGGAGCTACTGGTATGGTATGGCAACAGCTACGAGCGTTATATGGATCTGCCAATTTGCTTCAAGGCCGTGAACAGAAAGTTAAGTAGCGTGTCCGAGGAACCCGATTTACAAGTTCAAGAAGAACCGGGTTCCTACCCTTGTGAGCACTGCGGGAAAGTGTTCTCTTACAAGTACTATAGAGACAAGCATCTGAAGTACACGCGTTGCGTTGACCAAGGCGATCGTAAATTCCCCTGCCATCTGTGCCAACGGTCATTTGAAAAGCGCGATCGCTTGCGAATCCATATCCTACATGTGCACCAAAAGCATCGCCCACATATGTGCAATGTGTGTGGCAAGCGATTTTCCCAATCAAGCAGTTTAAGCAAGCACCAAAGGGTCCATAGTGGGGAAAGGCCGTACAAGTGCCCACATTGTGTGAAAGCATTTACCGCATCATCGATACTGCGCACTCATCTGAGACAGCACAGTGGCGAACGGCCATTCAAATGCAAGCACTGTGGTAAGGCATTTGCATCGCACGCCGCACACGATAGCCACGTAAGGCGAACGCATACGAAGATCAAGCCGTGTGTCTGCAACATATGCAATAAGGCGTTCGCTCAGTCATATGAGTTGAAATTCCACATGAATGTTCACACGGGAGCGAAACCTTATTCGTGCGAGAAATGCGGGCGCGGATTTTCAAGCCCTTCCTCGAGAGATCGTCATAGGCATCATTTCGACTGCAAAAGCAAAACACGAAGCGGATCAAGAGATTGTTCAAATTCGAAAAGTAACTCTCCAGTTGATGTCAATAACAACGATATATCTGATGACGTTTTCGTGGATTAG

Transcript

BRAKERKYLT00000013108

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9GZV8	PR domain zinc finger protein 14 OS=Homo sapiens OX=9606 GN=PRDM14 PE=1 SV=1
E9Q3T6	PR domain zinc finger protein 14 OS=Mus musculus OX=10090 GN=Prdm14 PE=1 SV=1
Q8BTG7	Protein NDRG4 OS=Mus musculus OX=10090 GN=Ndrg4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001579 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03096 all species →	Ndr	Ndr family	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR050331 all species →	Family	Zinc finger	Interproscan
IPR004142 all species →	Family	NDRG	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16515 all species →	PR DOMAIN ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000013108.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.