Genomic Location: not available for this species
NR annotation: BAD93133.1, CSDA protein variant, partial [Homo sapiens]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000013749 |
| Transcript |
| BRAKERKYLT00000013749 |
| Protein |
| BRAKERKYLP00000013749.1 |
| UniProt accession | Description |
|---|---|
| P16989 | Y-box-binding protein 3 OS=Homo sapiens OX=9606 GN=YBX3 PE=1 SV=4 |
| Q9JKB3 | Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2 |
| Q62764 | Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002110 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 all species → | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002059 all species → | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR019844 all species → | Domain | Cold-shock (CSD) domain | Interproscan |
| IPR011129 all species → | Domain | Cold shock domain | Interproscan |
| IPR050181 all species → | Family | Cold shock domain-containing protein | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11544 all species → | COLD SHOCK DOMAIN CONTAINING PROTEINS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0010468 all species → | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K09276 | YBX1, NSEP1; Y-box-binding protein 1 | - | Spliceosome | ko03041 | deepkoala |
