Gene detail

Detailed information of BRAKERKYLP00000013879.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_026692792.1, 6-phosphogluconate dehydrogenase, decarboxylating-like [Ciona intestinalis]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DCD0	6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3
P00349	6-phosphogluconate dehydrogenase, decarboxylating OS=Ovis aries OX=9940 GN=PGD PE=1 SV=4
P52209	6-phosphogluconate dehydrogenase, decarboxylating OS=Homo sapiens OX=9606 GN=PGD PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000618 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03446 all species →	NAD_binding_2	NAD binding domain of 6-phosphogluconate dehydrogenase	Domain	Interproscan
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006115 all species →	Domain	6-phosphogluconate dehydrogenase, NADP-binding	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR006183 all species →	Family	6-phosphogluconate dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11811 all species →	6-PHOSPHOGLUCONATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0050661 all species →	Molecular Function	NADP binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004616 all species →	Molecular Function	phosphogluconate dehydrogenase (decarboxylating) activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0009051 all species →	Biological Process	pentose-phosphate shunt, oxidative branch	Interproscan
GO:0046177 all species →	Biological Process	D-gluconate catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12893	SRSF4_5_6, SFRS4_5_6; serine/arginine-rich splicing factor 4/5/6	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.