Gene detail

Detailed information of BRAKERKYLP00000015225.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_020601018.1, vacuolar protein sorting-associated protein 16 homolog [Orbicella faveolata]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VHG1	Vacuolar protein sorting-associated protein 16 homolog OS=Drosophila melanogaster OX=7227 GN=Vps16A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001418 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04841 all species →	Vps16_N	Vps16, N-terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016534 all species →	Family	Vacuolar protein sorting-associated protein 16	Interproscan
IPR006926 all species →	Domain	Vps16, N-terminal	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12811 all species →	VACUOLAR PROTEIN SORTING VPS16	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0007033 all species →	Biological Process	vacuole organization	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0030897 all species →	Cellular Component	HOPS complex	Interproscan
GO:0042144 all species →	Biological Process	vacuole fusion, non-autophagic	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000015225.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.