Genomic Location: not available for this species
NR annotation: XP_045626362.1, RNA-splicing ligase RtcB homolog [Procambarus clarkii]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000015504 |
| Transcript |
| BRAKERKYLT00000015504 |
| Protein |
| BRAKERKYLP00000015504.1 |
| UniProt accession | Description |
|---|---|
| Q5E9T9 | RNA-splicing ligase RtcB homolog OS=Bos taurus OX=9913 GN=RTCB PE=2 SV=1 |
| Q4R6X4 | RNA-splicing ligase RtcB homolog OS=Macaca fascicularis OX=9541 GN=RTCB PE=2 SV=1 |
| A9CB42 | RNA-splicing ligase RtcB homolog OS=Papio anubis OX=9555 GN=RTCB PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003319 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01139 all species → | RtcB | tRNA-splicing ligase RtcB | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036025 all species → | Homologous_superfamily | tRNA-splicing ligase RtcB-like superfamily | Interproscan |
| IPR001233 all species → | Family | RNA-splicing ligase, RtcB | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11118 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0008452 all species → | Molecular Function | RNA ligase activity | Interproscan |
| GO:0000971 all species → | Biological Process | obsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate | Interproscan |
| GO:0003972 all species → | Molecular Function | RNA ligase (ATP) activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0072669 all species → | Cellular Component | tRNA-splicing ligase complex | Interproscan |
BRAKERKYLP00000015504.1.
