Gene detail

Detailed information of BRAKERKYLP00000016192.1 in Mastigias papua

Genomic Location: :...
NR annotation: CAH3150863.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000016192

ATGGAGTCTTTGATAAGATACATCAAAGTAATTGGAGGCCCCACTGGTCGTGAGGGCCTTTTGGTTGGCCTGAAAAGTGGCTTGATATTGAAAATCTTCGTTGATAATCCGTTTCCAGTTTCATTGTTGAAACAGCAGACAAGTGTTCGCTGTCTCGATCTTAGTTCGAACCGCACAAAATTAGCAGTTGTAGATGAGAATAACACCTGTCTTGTCTATGATTTGAAATCAAAGGAACTGCTGTTTCAAGAACCAAATGCTAATAGCGTCTCATGGAATACGCAGAATGACGCTATGCTGTGCTTTTCTGGTGGTGGCATGCTCAACATAAAAGCAAGTAATTTCCCTGTTCATCAACAGAAAGTTCCGGGTTTTGTTGTTGGATTTTGTGGATCTAAGATATTTTGCCTTCATGTCTATTCGATGTCATCGGTTGAAGTACCCCAGtcCACGCCGATGTATCAATATTTGGAAAAAAAGTCATTTCTAGATGCATATAAAGTTGCATGCCTCGGTATCACTGATGGTGATTGGCGATCTTTAGGAATGGCTGCACTTGAGGGTCTTGAATTTCATATTGCAAAGATGGCCTTCATCAGAATCCGTGATCTTAGGTATTTGGAATTAATTCAATCTATCGAGGAACGCAAACGAAGAGGTGTAACTGATAACCAGATATTTCTTGCAGATATATATGCCTACCAAGGAAAATTTCAAGAGGCTGCAAAACTGTACAAGAAAACTGGAAATGATGAAAAGGCATTGGAAATGTTTTCAGATCTACGCCAGTTTGAATTTGCCAAAGAGTACATTGGGAACGGTGATCAGCGCAATGTAAAGCAATTAATTCGAAAGCAAGCTGAATGGTGTAAAAGTACAAATGATCCACGTGCAGCAGCTGACATGTTCATAGCAGCCGGAGAATTTACGAAAGCAGCAGAGATACTTGGAGAAAATGGCTGGGCTGAAAAACTAATTGAACTTGGCCGTAACTTAAACAAAGCCGATACTGAACCATTGAAGTTATGTGCAATTTACTTGAAAGAATTACAGCAATATTCGTACGCCGCCGAGATGTATTTGAAAATGGGTGACCTGAAGGCTTTAGTACTTTTATATGTGGATTCACATCAATGGGATGAGGCCTTTCAGCTCGTTGAAAAACACCGAGAATTTAAGGATGATGTTTATGTTCCATATGCAAACTGGCTTGCAGAAAATGATAGATTTGATGAAGCGCAAGCAGCATTTCACAAAGCTGGTAGACGAAGAGAAGCAATCAGAGTTCTTGAACAGTTGACGTCAAATGCAGTCACCGAAAACAGATTTAACGATGCTGGCTATTACTTTTGGCAACTTTCAATGCAGTGCTTAGACATTGCTGGGAAGGAAGATGGTGCTGAATCGGAGGCTAATATCCTGGACaaattttttgaatttcaaacaaaaggGGAAGTTTATTACGTTTACCATTCAATTCAAAGATATATGGATGAACCATTCACCTCGCAACTGCCTGAAGCATTGTTCAATATGGCCAGGTTCCTTTTGCACATGTTAATCAAAGACACACCTCATGGAATTTCAAGAGTAAATGCTTTGTATGCCCTTGCGAAACAAAGTAAAAATCTTGGTGCTTTTAAGCTGGCGCGGTATGCTTTCGATAAACTACAGGCATTGAAAATTCCATCGCGTCTTCAAGAGAGCATTGACCTTGGAAGCATAACCATTAGATCGAAGCCATTTCACGACAACGAGgATTTGCTGCCAATTTGCTATCGTTGTTCAACTACGAACCCATTACTAAACAACAAAGGGAATCAATGTATTAACTGCGCACAACCATTTGTCCACTCGTATATTGGATTTGAAATCCTCCCTTTGGTCGAGTTCATGCTTGAAGATGACATTAGTGACGAGGAGGCGATCAAATTAATAAAAACAGAGGAGCtaacaaaaaagaagaaagataagTTAACAGAAACAAACGATGGAAGTATCCTTACTCTAAAatgtttaattttcttttgtttattgaCTTTGAGCACAACTGGCTGA

Transcript

BRAKERKYLT00000016192

Protein

Uniprot

Uniprot term	Description
Q6NYH1	Intraflagellar transport protein 122 homolog OS=Danio rerio OX=7955 GN=ift122 PE=2 SV=1
Q6NWV3	Intraflagellar transport protein 122 homolog OS=Mus musculus OX=10090 GN=Ift122 PE=1 SV=1
A8WGF4	Intraflagellar transport protein 122 homolog OS=Xenopus tropicalis OX=8364 GN=ift122 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR039857	Family	Intraflagellar transport protein 122/121 homolog	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12764	WD REPEAT DOMAIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030991	Cellular Component	intraciliary transport particle A	Interproscan
GO:0035721	Biological Process	intraciliary retrograde transport	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0061512	Biological Process	protein localization to cilium	Interproscan
GO:0097730	Cellular Component	non-motile cilium	Interproscan
GO:1905515	Biological Process	non-motile cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20179	VPS11, PEP5; vacuolar protein sorting-associated protein 11	-	Membrane trafficking	ko04131	deepkoala