Genomic Location: not available for this species
NR annotation: XP_029199743.2, cadherin-23-like isoform X2 [Acropora millepora]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000016309 |
| Transcript |
| BRAKERKYLT00000016309 |
| Protein |
| BRAKERKYLP00000016309.1 |
| UniProt accession | Description |
|---|---|
| Q6V0I7 | Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2 |
| Q99PF4 | Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2 |
| Q2PZL6 | Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000235 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00092 all species → | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF00008 all species → | EGF | EGF-like domain | Domain | Interproscan |
| PF13927 all species → | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF01085 all species → | HH_signal | Hedgehog amino-terminal signalling domain | Domain | Interproscan |
| PF00028 all species → | Cadherin | Cadherin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002126 all species → | Domain | Cadherin-like | Interproscan |
| IPR015919 all species → | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR003598 all species → | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR002035 all species → | Domain | von Willebrand factor, type A | Interproscan |
| IPR036860 all species → | Homologous_superfamily | SH2 domain superfamily | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR009045 all species → | Homologous_superfamily | Hedgehog signalling/DD-peptidase zinc-binding domain superfamily | Interproscan |
| IPR020894 all species → | Conserved_site | Cadherin conserved site | Interproscan |
| IPR036465 all species → | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR000320 all species → | Domain | Hedgehog, N-terminal signalling domain | Interproscan |
| IPR000152 all species → | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| IPR000980 all species → | Domain | SH2 domain | Interproscan |
| IPR001881 all species → | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR018097 all species → | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24026 all species → | FAT ATYPICAL CADHERIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0098609 all species → | Biological Process | cell-cell adhesion | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
| GO:0007267 all species → | Biological Process | cell-cell signaling | Interproscan |
BRAKERKYLP00000016309.1.
