Gene detail

Detailed information of BRAKERKYLP00000016468.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_029190700.2, protein transport protein Sec31A-like isoform X2 [Acropora millepora]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000016468

ATGGCAACAAATGAAGCTCGTTTTGATGGTGAAATGACTGACGATAAAATGGAAGGCAAAGACTATAAGGTTAAAGTAATATGTTTGGGAGACAGTGCGGTTGGAAAATCAAAATTAGTGGAGAGATTTTTAATGGATGGATACAAACCTCAACAGCTATCAACCTATGCCCTGACACTGTTCAAATATGACACACAAGTTGATGGGAGAGATGTTGTTGTGGAGTTCTGGGATACTGCAGGACAGGAGAGGTTTAGTAGTATGCATCCATCATATTACCACCAGGCCCATGCATGCATTTTGGTGTTTGATATAACTAGAAAAATCACTTACAAAAATCTTGCTCAATGGTACAAAGAACTTCGAGAATACCGACAGAAAATCCCTTGTATTGTAGTAGCTAACAAAATTGATGTTGATACCAGTATAACCTCGAAGAGCTTCAACTTTCCAAAAAAATATAGAATGccattttattttgtatcagCATCGGATGGGACAAATGTTGTCAAGGTATTTAGAGAGGCGATAAAACTAGGATATAATTACAAAGAAAATTCATCAGATTTTATGGACGAAGTGATGCGTGAATTAGAGATGACCAAGGTTAAGGAAGTAAAAAGAACTGCAAATATAGCATGGAGCCCCAAGCAGCAGCACCCTATTTATCTAGCAGCAGGAACAGCAGCTCAACAACTAGATGCAACATTCAGTACAACTGCTGCATTGGAGATATTCCATGTGAACTTTGCAAACAGTGATGTTGACATGCCAGTAGCTGGCTCATTAGAATGTACTCAGAGgCTTCACAAAGTTATTTGGGGCAGTCATGGAATAACATCTGGGGAGTATGAATCTGGTATTATCATTGGGGGCACTGACAATGGGcacatttatgtatataatgcAGCTAGCATTCTGGCTGGTGAAGCTAATGCTGTTGCTTTGCAACTTGATAAACACAACGGTCCTGTCCAAGCTTTGGATGTTAATGCATTTCAAGAGAACCTCCTTGCTTCAGGTGCTAGTGACTCTGAAATATACATTTGGGATTTGAGAAAACCAGACAGTCCACTTACTCCTGGTACCAGGACAACCCCATTAGATAACATCAGCTGTGTCCACTGGAATAAGCAAGTGCAGCATATAATGGCGTCGTCTTCTCCATCTGGCAGAGTTGTTGTATGGGATTTAAGGAAAAGTGAGCCTATTATCAAAGTGGGAGACACATCAGCTATGCTGCATTGCAAGTCGATGGCATGGCACCCTGAAGTAGCCACGCAGATGGTGATTGGAAATGAAGATGATAGATACCCTGTTATTCAGTTGTGGGATTTGAGATTTGCAACTTCACCTGTGAAAGTGATGGAAGGTCACCAAAGGGGCATTTTGTCACTGGATTGGTGTGCTCAAGACCCAGACCTTCTAATGAGTTGTGCTAAGGATAACCGAATTCTGTGTTGGAACCCAAATAGTAGTGCACAGAATGGCGagATCGTTTATGAGCTCCCGACAACCTCGCAATGGTGTTTTGAGGTTAGCTGGTGTCCTAGAAACCCCGGTGTAATCTCAACAGCATCTTTCGATGGTCATGTGACCATAAGCTCAGTGATGGGAGGTGGAGCTGCGCATAGTGACGTGCCAGATAAGGTCGCAAGTTCATTTGGCGGAGACGCGTTTGGAAACCAACAGCATGTGgtgcagcagcaacaacaggaGAAACCTTCCTCGGAACCACTAAAGAAACCACCGAGATGGATGAGACGGCCTTGCGGTGCCAATTTTGCCTTTGGTGGAAAGTTGATCACGTTCGCAGACCACAAAGACTCTCCCGCGAAGCAAGTGTCTATAAGCCAAGTTGTGACGGAGGGAGAATTTTTGAAGCGATCAGGAGACCTGGAAGGAGCTTTAGTTTCTGGTAATTTAGTTGAATTCTGCGATCAAAAGATTGCCCAATCTAGCAATGAAACGGAAACAACGTTATGGAGCTTTTTAAAGGTCAATTTCGACAAGGAACCAAGACTCCAATTTTTGGATCTTCTTGGTTATCATCCCCAAGAGCTGTCGAAAAAGATTTCTAGTGTTTCGGGTGGGTCAAAGTCCCATCCATCCTACTTACAAAACTCACTCGATGCTGACGAACTGGCTAGTAAAATGCAACTGCTTGGAACTGGGGAAGCAAGAGCGGTAAAAAGTGAAGGCGGCCTAACTCACAGTGGATCGATGTCACCAGCACAGGGTGTTAAGACACCAGTTTCTGACAATGAGGTTGGATCAGCGTTTGATTTGATTGGCTCATCAAGCATTGACACTTCTTTCAGTGCAAACACATCAATGATAGAGGATCCGGGAAGACCAGTTTCACCTCTGATTATTTCAGTAGATGAAGATACTGATGGATACGTTAGTCAGGCTCTGCTGACCGGGAACTTCGAAGGCGCGGTAGATCTTTGTTTCAAAGCGGATCGAATGGCAGAATCTTTGATTCTAGCTGTCGCCGGTGGGCCAGAGTTGTTTGCAAGAACTCAAAAGAGATACCTAGATCAAGCAAGAAGCTCAATTTCAAAGCTTATAAGCTGCGTCGTCGGCCGCGATTGGAAATCACTGGTTGAGACATGCGCCATTGATAACTGGAAAGAGGCCCTGGCTACCTTGGTAACTTATGGGAAAGCAGAGGAGTTCTTTCAGCTTTGCGATCTCCTCGGTCAGAGACTTGAGATCGAGGCTCGAAATTATTCCTCGGCAATGATATGTTATATTTGCTCAGGGAACATTGAAAAGCTTGTGTCCTGTTGGAGTAAAACAATTCCCAAAGATGCATCACCTTTGATGCTTCAAGATTTAATTGAGAAGgttatgattttgaaaaaggCCGTTGAACGAGAGAAGAAACAAGTTGCCACAAGCTCTGTGTTAGCCGATCAGCTGAGCAAATATGGTAACATCCTGGCGTCACAAGGTTGCTATGAAACTGCAATGGTTTACCTTACCACCATCAACGATCAGGGTGTCGCTGTTATAAAGGATCGATTATTACAAGCTCAAGGACATAGGGTACCAGACTCACAACTtccctttgagaaaatcaacgTGCGTGCATCACCGGCTCCCAGACCTCAACAACAGCAGCCACAAAATTTGCCTAAGACCCCAACTCAGCCGCAACCGTCCTCTCTTGGTTTCAATCAGCCCTCTCCAGTTCAACCAAACCTACCGCCTCATTCTCAGTTTTATAATCCAACATCATACACTGGAGCACCCTCGCAGAACACATTCCACATGTCACCTAATGTCATGGGTGCACCAACCTCACAGACAGCCACTTCATCACCGAATTTTGTAAAGCCCCCAAGTGCTCCACAACCATACATGCAGCATTACCAAGCTCCAGGACAATACCAGCCGATGCCCCCCGTCTCTCAGATTAACCAATACGGATACCAAATACCTGCTCCTTCGGACAACCAGTTTCAACCGGGACAAGGCTATGGAATGGCAATGCCAGGTCCACCTCCCGCTTCGGATCCAAGTAACTCTCAGCCACCGATGTCACTAAAGGCATCAAAACAGGAAACGCATGCACCACCTCTCCAGGGACAAAACTTCAATCTTTACAACCCAGCAGATGCTCAAAAGAACCAGCAAAACTTAAGTAAAGCTCCACTAACTCCACCTGGAACATTTGTGCCTGGTCAAACTGTAATTAATGACAAGACTGAGAAACCGTCACAGCCGGAACCAGAGCCAGTTAGAAAAGAGACGCCTGTTGCGCCAATTCCGGCTGAACACATGGTGCTCCAGCAGACCTTCAATGCAATGTTAGATCGATGCCGATCTGCTGCCAATAATCCTCAAACCAAGAGGAAACTTGAGGATGTGACAAGGCGCGTGGAATCTTTGTACGATATGCTTCGAGTCAATAAGTTGTCATCAAATGTTCTTAATGGACTGCACCAGATCTCCCAAGCTTGTCAACAGATGAATTACCAGCAAGGGCTTCAACTGCATACTGAGATGGTAATCAGAGGGAATTTCTCAGAAATCGGCAGTTTTATGCCTGGCTTGAAAACTTTGATGCAGATTGCGACGAATCTGAGAGTTTGA

Transcript

BRAKERKYLT00000016468

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7SYD5	Protein transport protein Sec31A OS=Danio rerio OX=7955 GN=sec31a PE=2 SV=1
Q5F3X8	Protein transport protein Sec31A OS=Gallus gallus OX=9031 GN=SEC31A PE=2 SV=1
O94979	Protein transport protein Sec31A OS=Homo sapiens OX=9606 GN=SEC31A PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003500 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF12931 all species →	Sec16_C	Sec23-binding domain of Sec16	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040251 all species →	Family	Protein transport protein SEC31-like	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR024298 all species →	Domain	Ancestral coatomer element 1, Sec16/Sec31	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13923 all species →	SEC31-RELATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0007029 all species →	Biological Process	endoplasmic reticulum organization	Interproscan
GO:0030127 all species →	Cellular Component	COPII vesicle coat	Interproscan
GO:0070971 all species →	Cellular Component	endoplasmic reticulum exit site	Interproscan
GO:0090110 all species →	Biological Process	COPII-coated vesicle cargo loading	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14005	SEC31; protein transport protein SEC31	-	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.