Gene detail

Detailed information of BRAKERKYLP00000016767.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: KAJ7391638.1, Tyrosine-protein phosphatase non-receptor type 13 [Desmophyllum pertusum]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000016767

ATGGAAATCTCCCTTCGAAAGCGAGGCACTTCTTTTGGAATGAACGTAACAGGTGGTCTTGGCTCTCCTTTTGACGGTATTTATGTTCAATCAATTGAACCAAACGGTGCTGTAGATGAAGATGGCAGAATACAAGTTGGTGACTGTCTGCTGCACGTGAATGGAGTTGACATAAGGAAAGTGACTCATAACCAGGCCGTCAAAGTGCTTCAAAGTGCTCCTGTTAGATCGACATTTTTGATCAGTAGAGCTCTCTCTCGTTCTTTAACCGAACTCCAAGTAAATCACGGAAAGCCACCAGTTGATGTGAGCAGAATGAGTGGTGATGAATCGTCGAGATCTTCCAATGCTTCAGTCAAGGACACTTTCATTGTCAAAATTGATAAAGGAATTGGAGGTTTGGGATTAAGTCTATCCGGTGGAGTTGGCTCGGCTCCTGAATTTAAAGATCGTATCATGGTCCGGCGATTGTTCCCTGGTCAGCCAGCGGCGGCTTGTGGCAAACTACGAATTGGTGACATCATACTCGCTGTGAATGGATCTAAAGTTGCCGGATACACACAACAAGAAGCTATCAATTTGCTGCGAAGGACCAAGCAATCTGTGAAATTGTTAGTAAAGAGACCTCATCCAAAGGATATCCCAGAAGAATTGCTCGCAGAGACGCCCAGAGAATCTTTGGATCCAAGCTCAGTTTTGAAAAACATTCAAGCAAAGATTAGCGAAGATGCCATTCGTCAAGTACCCGAGCCTCCCAAGAACCCGGATTATAGTGACGTCGATCAGTTCTCCTTGGATTCATATGGTCACCGGAAACAGGGTACTGATGGGGAAGAAATCATACCATATCCTGAGAATATTGCATCATTGGAAGTCGAGCCCTCGATTCAGAAAACCTCGAGTCCAAAGCACATATCAGCACATGAAGTTCTGGTGCATGCCCAGATATCGGGCCCTAGGCAAAAGAGCACGCAAAGTAAAAATGTTGGTCTGCTAGGCAATGGGAACGAAATCTATCATGAACGGCCTATATCTCCTCCAGATTTAACCGAATCTCCTTCGGCTGCTCACAAGGAAACAGTGGAAGAGCCTATTATTCAAGAAGGAGTTAGAGAATCCACCTTCGAGCACGAGCTATCTCTTCCGGATTTAGAAGAACTTACCGGCTCCTCTCAAGGACAGCTCCCGGATGATTCTTATGTAGCGGATAGTAATAATCAGGATTATTCAAAACATGAACTATCACTACCGGATCTGCCATCTGCTGAAGAAATGACCGGGTTGAAATTACCGGATCCGACATCTCCGGATATTCAAAATATGCACGTCAATTCAAGCAATTTGCAGGTGCCAGTGAAAGACCACCAAAGTGAAACATCGTCCATTACTGATCCGGACATGAGCTCTGAGGAAGAGGGCATCCTGCTTGAAATTGACCGCAGTAAGAAAGATGGTGCAGCAGCTGGTACAGCAGCGGGCACTAGTAATGAGCCCTCACTTTCGCAGCCTTTCTCTATGGGAGAAAATGATGCTGATACTAGGCAAAACAGAGCCGAAAGTCCTTTGCTCATCTCTGATTCATCAGCAAAGCAAACATCAATTCAAGATTTCCCTGCTAAACAGGATGAGCaaaattatgtttattttgaGGTGTCTTTAGAGAAAGGAAACTTGGGTTTAGGCTTTCTATTGCATGGGGGAAAAAGTACAACTGgTGGCTGCTTCATCCAGGAAGTCGTATCTGACCCTGCCAAGTCGTGTGGAAAATTACAATGTGGTGACGAGATTGTCATGGTCGATTCAGTTGACGTGAGGGAATGCGAGCATATGGATGCTGTAGAGCTTCTGAGAAGAACAAAAGGCCTTGTTAGGCTAGGAATCAGACGAGAAATCAAGAATCAAAAGTCCGATGTGAAGGTTCTTGGTTTCGAGATGGTAACATTGGAAAGAGATCCCACAGGAAGGCTTGGATTAACCCTTGGCGTGGAGGATGGAGAAATAATCGTTGAAGACATTGTTGCAGACGAACCTGCAGCATTAAATGGCAACTTGCGCCACGGAGACATTGTGAAGGAAATAAATGATCTTCCTCTAAAAGACATATCGCTGCAGGATGCAAATGTTATTCTGAATGATGCCAATCCCATAGTGCAATTAGCCATTCAACGGAAAACGCATACATCTCGGCAATCCAAATACGCCATTGATGGGAGTGGACGCAAACTATCTACAGAAAAACGAGCAATGTCTGGGGACTGGACAAAGCCACCTTTGGAAAATGGGACGAAGACTTTATTTCCGTTTGCAAGAAGTGACAGTTGGCGAAGTGATAGTAGTGTATCTTCTTCGCCTAAGAAGAATTCCGTAACAAATTCTCCCGTTTTGAAGAGACTTGAAGTGGCTCAAGATAGTGGTGTGGGTTTGCGATTACGGAAGCTTAGCAGTCAAGAAGATAAAGGCGAAATCATCATTGTCCAATTGGAGAGAGGTCCCTCTGGCCTTGGAATGAGGTTAACAAGCCACAATGATTTTGGAGACAAATCTGGAGCATTTATCGCGAATATCATCCCTGGAGGAACCGCAGCGAAGACGGGAAAACTCAGGTCGGGGGACAAAGTTATAAGTATCAATGGTACCAATGTTGAGCAGAAACACCAGAAAGAGGTTGTTGAAATTCTAAGAAGCACCAATGGGAAGATCACGTTAGAGCTCTTCAGATACCCCGTAAGACTCTTCAGCAGTATGGACCGCGGATCCAGCATCGCCAGTTCTGACTGCAGGGACGTGAATGATCTAGCTGAAATGGATTTTCACTTCGTTGAAGAAGGTAGTCATGGGGAGTATGGGGCACTGTCGGATAAACTGTTGTCTTTGCTGCCCATATCTAATGTTGAAGATGCAAGTGAACGATCAGACGGGAAGGATACGATTCAAGGCGGGGGTGAGTATGAAAACACGACGACGAGAGATGATTCAAATGATTTGAATGGTGCTGACAATCGGGATTTCGATGGGATGAAGGCTGGGAATATTGATCCTCAGAGTGAACGTGAAACTGGAATCAGATTAGATGTAGATTCCCAGAATGATCCAGTAATAGGGGGCAATGATCAGACGCTTTCTCACGACTCTTTCACTTCGAAAAATCCCGCTGATCAAGGATTTGACAAAAGTGGACTAGATCAGAATGTGCGATACGATGATAAAGACCCGTCTTGGAACGATTCTGATATTTCGGATGAGGAGTGCTCTAAACTACCACCAATAGATACAAATCCAGGAAGGACGATTATCGAGAAATCTAGTTTCTCCACCAGTTTAATTCCTAAGAAAATCACCACCGTTGAAAAGGTCTTGGGAACCGGAAATGGCCAAGAGACGTCGTTTTCGTCGACGCTTGAGAAAGTGACACCGTCGTCTTCAATAGTTAGTTCAATCTTGGATGAAGTTTCGCCTGTTAATTCTTCAGACGAAGAAGTGTCCGATTTTGATTTCTCGTCATCAGTGTTACCGGATTTGAGTTCATTCACAATTGAAGATAAAGAGGCTTTTGAAAAATTCCATGGGCAAAACTGGGAGAAGACAGAGCCCATCGATGGTGTGAATccgaaagttgataagttagaTGGACCTGTGATCGTGGCTGAAATTAGGAGCGATGAAAATGGCTTGGAAGATATCattgtggaaaatgaagagaaagttATTACTGAACCTACTCAGTTGGATTCAGGTCTTGTAGGTACGATTGTAAACCAACGAACAGATTCCTTCTCCAACGATGTCGCAGGTAGTTATGGCTCTGATACCAAGAGGGATAGCTTTTTGAAGGATTCTGATAATGATCTTAATGAGTCATTTGTTGAAGGCCTAAGTTCAATGGAAGCTGATGCGTCCGACGTGCTCATGGCTCTGGACGAATTTGAAATCCGAAAGAAGGAGGAATTTAACGATACCTTGAAAGGACAAATAGAGGGTGAACCGTTCCATTCAGAAACTTCCTTTACGGTTGAGAAGATGGGCGAAGAATATGCGGGGAGAAATGAAAGTAGCTTTGCAAAACAATCTCCCGCTGTGGAGAGAAGATCAAAAATACCAATATTTGACAGTAAACGCCCGGGAGCCTCAAACAGTCCATCACGTCGATCCCCAGTAAGGAGTGGCATTCCTGTTTTCACGGCTGCAAAATCAAAAACTGATATTGAACTTACTGAAAAGGGCACAGCAAAGAAAGGCACAAGTCCGGTTCAGTTGGAGACTGCTTTTACAGACAGGGACAATGTTGCTACTGGAACAAACAAGGATGTGATCGATTCAAGCAGATTCGAAGTGGATATTGAAGTGGATGGGGATAGTGATAACAGCTTCGAAACTGATGATGATTTGGCGTTAAGCTTAACTCGTGATACGTTTTCATTTGGGCAGGAAGAATTGGAtgtaaaaatcgctcatttccaaaCAATTTTGAATTCTGACATCATCGATAGAGAATTTATGgAGTTGAAAGACATGAAATCTACAGATTCCTGTGATGTTGCTAGAAGATCCGCTAACAGAGATAAGAATCGATTCAGGAGTATTCTTCCATATGACAAAACTCGAGTTTGCCTGGCTGGTGGAGAAGAGAAAGATTACATAAATGCAAGTCACATCAAGTTTGAAGTGGCTGGGAGGTCATTTCATTACATCGCAGCGCAGGGTCCTCTTTCCAATACAGTAGATGATTTCTGGCGGATGGTCTGGGAGCAGAAAGTTGAGACAATACTTATGGTAACAAAAGATGTTGAAGGTGGAAAGATAAAATGTCACAGATATTGGCCAGATCTTCCAGGCATTTCTCTGAAGGCGTCTGATCGATTTAGAGTCGAGCTGGTGCATAGAAAAGAGAGTGGAAATCATATTGAAAGACAATTTTCGCTGATAAACACAAAGATCAACAAGTCTTTCACTATCAACCATCTCTTGTTTCATGCATGGCCAGATGCAGGGCTTCCTAAGGAAACATTGCCTTTCTTAATGTTCGCCAAGCACTCTGCAGAAGTACACACCTCTGGTCCACTTTTGGTTCATTGCAGTGCGGGAACTGGTCGAACAGGTCTCTTCATAGTCACAGATGTGCTGAATAAAATATTGCCAACAGATGCCACAGTGGATGTTTTGACTCTGGTCAAGTCCATGAAACGTCAAAGGCAATCGTTAATTCAGACAAAGTTTTATGATGATGACTGTGGggatgatgttaatgatgattatgatgatgataatgatgatgatggtggtggtggtggtggtggtggtggtggtgatggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggtgatgatgatggtgatgatgatgatggtggtggtggtggtggtgatggtggtggtgatggtggtggtgatgatgatgatgatgatggtggtggtggtggtggtggtggtggtggtggtgatgatgatgatgatgatgatgatgatgatgatgatgataatcattGTTATTAG

Transcript

BRAKERKYLT00000016767

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q12923	Tyrosine-protein phosphatase non-receptor type 13 OS=Homo sapiens OX=9606 GN=PTPN13 PE=1 SV=2
A1L1L3	Tyrosine-protein phosphatase non-receptor type 20 OS=Rattus norvegicus OX=10116 GN=Ptpn20 PE=1 SV=1
O55082	Tyrosine-protein phosphatase non-receptor type 20 OS=Mus musculus OX=10090 GN=Ptpn20 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002606 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF00102 all species →	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242 all species →	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR052074 all species →	Family	Non-receptor Tyrosine-protein Phosphatases	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46900 all species →	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02374	PTPN13, FAP-1; tyrosine-protein phosphatase non-receptor type 13	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.