Genomic Location: chr3:16279806...16326313
NR annotation: XP_044182444.1, spatacsin-like [Acropora millepora]
Species Mastigias papua · all data for this species · gene families
| CDS |
| BRAKERKYLT00000018121 |
| Transcript |
| BRAKERKYLT00000018121 |
| Protein |
| BRAKERKYLP00000018121.1 |
| UniProt accession | Description |
|---|---|
| Q96JI7 | Spatacsin OS=Homo sapiens OX=9606 GN=SPG11 PE=1 SV=3 |
| Q3UHA3 | Spatacsin OS=Mus musculus OX=10090 GN=Spg11 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002279 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07679 all species → | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00059 all species → | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF14649 all species → | Spatacsin_C | Spatacsin C-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013098 all species → | Domain | Immunoglobulin I-set | Interproscan |
| IPR003598 all species → | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| IPR001304 all species → | Domain | C-type lectin-like | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR016187 all species → | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR016186 all species → | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR028107 all species → | Domain | Spatacsin, C-terminal domain | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| IPR028103 all species → | Family | Spatacsin | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13650 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19026 | SPG11; spatacsin | - | DNA repair and recombination proteins | ko03400 | deepkoala |