Genomic Location: :...
NR annotation: CAH3116792.1, unnamed protein product [Pocillopora meandrina]
| CDS |
| BRAKERKYLT00000018233 |
| Transcript |
| BRAKERKYLT00000018233 |
| Protein |
| BRAKERKYLP00000018233.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
