Gene detail

Detailed information of BRAKERKYLP00000018460.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_002156026.2, protein transport protein Sec23B [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D662	Protein transport protein Sec23B OS=Mus musculus OX=10090 GN=Sec23b PE=1 SV=1
Q15436	Protein transport protein Sec23A OS=Homo sapiens OX=9606 GN=SEC23A PE=1 SV=2
Q5R5G2	Protein transport protein Sec23B OS=Pongo abelii OX=9601 GN=SEC23B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005212 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04810 all species →	zf-Sec23_Sec24	Sec23/Sec24 zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036174 all species →	Homologous_superfamily	Zinc finger, Sec23/Sec24-type superfamily	Interproscan
IPR037364 all species →	Family	Protein transport protein Sec23	Interproscan
IPR006895 all species →	Domain	Zinc finger, Sec23/Sec24-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11141 all species →	PROTEIN TRANSPORT PROTEIN SEC23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0030127 all species →	Cellular Component	COPII vesicle coat	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0070971 all species →	Cellular Component	endoplasmic reticulum exit site	Interproscan
GO:0090110 all species →	Biological Process	COPII-coated vesicle cargo loading	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000018460.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.