Gene detail

Detailed information of BRAKERKYLP00000018503.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047132207.1, mediator of RNA polymerase II transcription subunit 6 isoform X2 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q921D4	Mediator of RNA polymerase II transcription subunit 6 OS=Mus musculus OX=10090 GN=Med6 PE=1 SV=2
Q3SZY9	Mediator of RNA polymerase II transcription subunit 6 OS=Bos taurus OX=9913 GN=MED6 PE=2 SV=1
O75586	Mediator of RNA polymerase II transcription subunit 6 OS=Homo sapiens OX=9606 GN=MED6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04934 all species →	Med6	MED6 mediator sub complex component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038566 all species →	Homologous_superfamily	Mediator complex, subunit Med6 superfamily	Interproscan
IPR007018 all species →	Family	Mediator complex, subunit Med6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13104 all species →	MED-6-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan
GO:0070847 all species →	Cellular Component	core mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15128	MED6; mediator of RNA polymerase II transcription subunit 6	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.