Gene detail

Detailed information of BRAKERKYLP00000018755.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAB4037955.1, Hypothetical predicted protein [Paramuricea clavata]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000018755

ATGGGAAAAAGAACTTCATTCATCTGGCTTATCCTTTGCATTACGTGCCATTTCTGCAACAAGGATTTCAAATCTTTGGGAAGACACGCTTGGAGATGCAAGGAACGCAACAAGCAGAACGAATCAGTCGTCAATAGCAACCATTCAAATATTTCGTTAGAACAAGCAGATCTCCAGAATTGTTCGCCAGTCAACAGCAGAAAAATAAAATGTGTTTGTGGCAAAGAAACCAAAACGCATGGCGGTCTCAAGAGGCATCAAAGGACGTGCCGTGCAATCACTGGCTTCAACAAAGACCTTTTATCAAATATAGCGCAGGAAATTGAAGCAGCTACGTCTCAGGAAAATGAATTCATTGATACTGAGGAAATAAGTAATGCTCCTGATACGAAGGTGAAAAAAGGCGTTAAACTTCCCAAATCTGAATCCCAATGGAGGGCTGCAAATGCATTTTTCCAAGCAAATCTATCGTTGCAGGCAATTTCTAATGGTCTTGAGGAAGCATGCAAGCTGTTCTCAACTACAATATACGATTACTTTGAAAAAGAATATGGGTCTGTTCAAAAAATCGATGAAGCAAGTGAATTGGTCGAAAAATATCGAAGCTACAGCAAAAATCAGCTAAAATCCTCtctgaaaaatctgaaaaagtcAAACGACACGAGAAATTATGATGAAATCCGATACATAAGCAAACTCTTAAGGAATAAGATTGACAAAATCAGTGGTAGTGAGCAGACCCTGCCAGCATCTTTCGACCATGACAACAGAATCAAGCAAAATTACTGGAAATATGCTAAAAACCAACTCGAAAAAGTCACTGAGTTGCTACCATCATTTTCGAATGCAGCTTGTTTCGAATATTTCAGTAAATTATTCAAGAAGAAGAGATCTGCTGCTAGCTTTACCAGGCCGGATTGGATGCCAAGCTATGAAAATCCAGAAAAGGATTTCAATTGTAACGCACCACCTTATGCAGAACTGAATAAAATCATTGGGAAAATGAGAACAGCAAGTTCTGCCTGCCCCCTTGATCAGATTTCTATAATCACACTGAAACGGTGTCCTTATTTACGTACATATTTGCTGGAAATCATCAGAACGGCCTGGGAAAGCAAACAGTCACCTGCTGATTGGAAACAAGCAATCACAGTCTTGATTCATAAAAAAGGCCCAAATGATGATCCCCAGAATTTCAGGCCGATCACTTTACAATGTGTTTTCTTGAAGGAAGCCGAATATCATTTGAAGCAGACTCTTGTCCATAACCCGTACCATTACAAAGCTATGTACAACCTTGCATCATTCTATAACATCAAACCGAATTATTACGAGGCTGTGCAGATATTGGCAGATGTACTGCATGATCTTGgagaaacacacagagcagtggagCTCTTTTACAATGCGTCCCTTGGATGCACTGATGCTAACTTCTTCAATAATTATGGCTATTTCCTTGGCAATATTGGTAAAGGGGATTTATCGCTGAGAGCGTATGAAAGGTCCATTGAAATCGACCCGAAACATAGGGTTTCTCATGTGAATTATGGTCGCCAGCTGAAGATTATGGAACGGCACCAAGAAGCAGAAGTTGCATATCGAAGGTACTTGTTTACAGCATACTTGTATACTTGTTTACACATATTTGCCCTTTTGAATCGGGTAAAAGCAGCGGCATCAGTATACAAAAACGGACGTATTTTTGCGATGATTTTCATGCGAAATGAGAACCCAATTTTCACAACAGCAATTGCTGTTTTTGAGCAAGAGCAGAAGGATGACGCTGTATATTTGCTAAGAGAGGCCTTGAAAATTTTGCCGAACTCATCAAGTATTGTCAAATTACTAGTGAACTTTCTGATGAATATCAGCAAACCGAACGAGGCATTGGATGCAGTCTCAATTGGACTAAGGTCTAATCCTGACAACTATGAATTGCATTTCATGAGAGCAAATGCCTTCAAAGAGTTGAAGAATTTAGACCTTGCTTTAGAGAGCTACAAAGATGTTGTCAAATTAAACCCAAAGCATTTCAGTTCCTTACAGAATATCGgtgttatatatcatattaagGGGTACAGCGTAGAAGCTAAGCATTTTTATGATAAAGCATTGGAAATCGAACCAGATAACAATCTCCTCAAGGACAACATTGCAAAGCTTGTGCGAACGATGCGAAAGAGATCGGATAAAGCAATTAAATCTTCTGCGAATATGGCCTAA

Transcript

BRAKERKYLT00000018755

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000212 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13432 all species →	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052943 all species →	Family	TMTC O-mannosyl-transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44809 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000018755.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.