Gene detail

Detailed information of BRAKERKYLP00000018887.1 in Mastigias papua

Genomic Location: :...
NR annotation: XP_012554836.1, conserved oligomeric Golgi complex subunit 3 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERKYLT00000018887

ATGATACTTGAAAAAGAAGAACCATCAAAGCAAGAAGAGAAGTTAACTGAGATTTCAGGCTTGGAGTGGGGTGGTAAAAAAGTTGAGAATGCACAGCAGTTCTTCACATGGTTTACTCAAGTTCAAGCGCAAATGGAGCAAGATCAAGAATATACATATAGGGAGCACAGAAATGAGCTTGATGACTACTGTACAAAGTGTAATGTAATATTGGAGCAGATTCAGCATCTTTTGGTGGCCTTGCAGGAGCTTCAGAGCAAATACACCTTTGTTTTAACACAAACTAGAGCTTTGCATGATGCTTGTGAGCAATCTATACAAGAGCAGGCAGCATTAACAAGTCAGGCTGAAGGCATAACAGAGAGACTCACATATTTTACTTCTTTGGAGAGTATCAGACATAAGATGAATGGCACAAAAATCTCAATATCTGGAGAATCTTTTGTTCCATTGTTAACTAAAATTGATGAGTGCATTTCTTATATGGAGAAAAATGCTCAATTTAAAGAGGCTCCTGTCTACCTGATACGGTTTAAACAGTGTCTGAATCAAGCTATTGGAATGCTCAAGCAACTTGTTGTCAGGATACTTAAAAGTGCCACCGAGCAGACATCGTCACATATAAATAAGCAAGAGCATGCACAGGAGACGTCATACACAGCCATgtatggaaaattcaaaaccCAGGCCTTCAGAGTCAAAAATATCATGGAACAGGTAGAACAAAAACGCGGGAACCAGAAGGAGTATGAGGCTTTTATTCAAGATTGTCAGAATTGTTATTTTGAATGTCGAGAGCAGATTATACATCCATTCATTGTCACAACTGTGAATAAATTGGTTAAACAACATATTCGAAACCACTGCACTCTAtttCGATCAGGTTGCTCATTTCTGGTTCATGTTTGCCAAGATGAATATCAATTATATTTTGACTTTTTCACAAAGAAGAGTGAAGGCTTAGATTTATTGTTGGAAGGGTTTTGCAACACACTCTACGAATCATTTCGACCCTTAATAATCTACATGACGCATATGGAAACTCTTGCCGAACTATGCAATATACTCAAGgttGAAATGCTGGAGGAGCATGTGTCGCGAAAAGGAGAACAATTGTCTGCATTTGAAGTTGTTGTATCACAGTTGCTTGAAGATGTTCAGGAAAGGCTTGTTTATCGGGCACAGGCTTATATAGGGAATGACATCGAGAATTACAAGCCTGCAGCTGGTGATCTTGCCTATCCTGATAAACTCATGATGGAGACCGGCAATGTTGCAGAGAAATctgatgatgaaaaagaaagccGACAATATCAAACTGTTGCAATGGTCGATCAACAGGCCATGTGGTACCCCACTGTTCGTCGAACGTTAGTGTGTCTATCAAAGCTTTACAATTGTATATCGAAATCCACATTTGAAGGTCTGGCTCAAGAAGCACTTTCAATCTGCATCAAAACGCTGAAGGCTGCTgctaaatcaatcaatgacaggAAGGGAGCCATCAACGGAAGTTTGTTTTTCATCAAGCATTTACTAATTCTGAGGGAGCAAATTGCTCCATTTGATGTTGACTTTGCAGTCAAAGAAGTAGCCTTAGATTTCTCAAAGATGAAAACAGCTGCTTTTGGTCTCCTTTCAAAAGGAACACGATTATTAAGTTTAAGTACAAACAATGCAATATTGGAATTTCTACTTGAGgGCGTGCCCCAGTTAACAGAGTACTGCCTTGATTCAAAAAAGGAGGTGGACACTGAATTGAAGAAGGTATGTGAGGAGTTCATAAGCACCGCTGTAGATGCATTTGTGAGCCCTTTGACCTCATTCTTGGACAAGATCGATACATTAGAAAAATTAGCAGAcgaagaaggaaaagaaaaacgGCATTTGATAAATCAGCAGCCATTTGCAAAGCCAGAAAATGTACGCAAAATTGTTAGCGAAGCTTATATGatgttgaaatcaaagcttCCTGGAATAATGGAGAGTATGTCTTTGTATTTGGCAAGTAAGGAGACGGAATACATTCTGTTTAAGCCAATCAAGACAAAAGTACTCAAGGTTTACAGGCAACTCTCACAGTTAGTCGAAGAAAATTACAGCATAGAAGATCAACAGATTATTGGCTGCCCATCTCAAGAGCAGGTTTCACTTCTGATGGCTTTCCGTTGA

Transcript

BRAKERKYLT00000018887

Protein

Uniprot

Uniprot term	Description
Q8CI04	Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus OX=10090 GN=Cog3 PE=1 SV=3
Q96JB2	Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens OX=9606 GN=COG3 PE=1 SV=3
Q961G1	Conserved oligomeric Golgi complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=Cog3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04136	COG3_N	Conserved oligomeric Golgi complex subunit 3, N-terminal	Repeat	Interproscan
PF20671	COG3_C	Conserved oligomeric Golgi complex subunit 3, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007265	Family	Conserved oligomeric Golgi complex, subunit 3	Interproscan
IPR048320	Domain	Conserved oligomeric Golgi complex subunit 3, N-terminal	Interproscan
IPR048685	Domain	Conserved oligomeric Golgi complex subunit 3, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13302	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005801	Cellular Component	cis-Golgi network	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0006891	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0007030	Biological Process	Golgi organization	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0017119	Cellular Component	Golgi transport complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20290	COG3, SEC34; conserved oligomeric Golgi complex subunit 3	-	Membrane trafficking	ko04131	deepkoala