Detailed information of BRAKERKYLP00000019641.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_047131119.1, uncharacterized protein LOC100214647 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SIB3Collagen alpha-2(IV) chain (Fragment) OS=Bos taurus OX=9913 GN=COL4A2 PE=1 SV=1
Q28084Collagen alpha-3(IV) chain (Fragment) OS=Bos taurus OX=9913 GN=COL4A3 PE=1 SV=1
P27393Collagen alpha-2(IV) chain OS=Ascaris suum OX=6253 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001899 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092
all species →
VWAvon Willebrand factor type A domainDomainInterproscan
PF01413
all species →
C4C-terminal tandem repeated domain in type 4 procollagenDomainInterproscan
PF00095
all species →
WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF01391
all species →
CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07648
all species →
Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035
all species →
Domainvon Willebrand factor, type AInterproscan
IPR036465
all species →
Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001442
all species →
DomainCollagen IV, non-collagenousInterproscan
IPR036058
all species →
Homologous_superfamilyKazal domain superfamilyInterproscan
IPR036954
all species →
Homologous_superfamilyCollagen IV, non-collagenous domain superfamilyInterproscan
IPR008197
all species →
DomainWAP-type 'four-disulfide core' domainInterproscan
IPR036645
all species →
Homologous_superfamilyElafin-like superfamilyInterproscan
IPR050525
all species →
FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR002350
all species →
DomainKazal domainInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR008160
all species →
RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020
all species →
COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005201
all species →
Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005581
all species →
Cellular Componentcollagen trimerInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan
GO:0030414
all species →
Molecular Functionpeptidase inhibitor activityInterproscan
GO:0062023
all species →
Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06238COL6A; collagen type VI alpha-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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