Gene detail

Detailed information of BRAKERKYLP00000019852.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: BAB13306.1, PL10-related protein CnPL10 [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000019852

ATGAGCTATGCAATCCACCGAGATGTTCGAAGTCTAGAGCAGCAGGTTGCTGGTCTGGACTTGAACATCGAAAGGGGCCCTCCTCGAAGAGACGGCCCATTGTCACGTCCACAAGGTGATAAGAAGTACGTTCCCCCTCATATGAGAAGCAGTGGTGACCGAAAGGCTGACTCATTTAACCAACAGCAAGGAGGGTATTCTAACCACAATTACAGGGATTTCTCTGGTCCACCAAGTAGAGGCTACCAAGGTGGCTATGGTGGTAGGCAAGACAACAGTAGGAGAAGTGGAGGTTTTGGTGGTGGTTCTAATTGGAATAGAGGCTATAACAGATCTGGTGGCAGTAATAGTGGTGGATTTCACTCACAGAGTTATGGAGGCTCATCAGACAATGATAGAGCAGTGTACAATGGAGGGAATGCAGCAGATTGGACAAAACCCCTTCCAAAGAATGACAGGCTTGAAAGAGAGTTGTTTGGTAACCGCTCAACTGGAATCAACTTTGACAAATATGAAGATATCCCAGTTGAAGCAACTGGAAATGATTGCCCAAAGCATATTGAGACATTTGAGGAGTGTAACCTTGTGGAGATAATCATGGAAAATGTTAAGCTATGTGGATACTCAAAGCTTACCCCCGTGCAAAAATATGCCGTTGCTATCATTCAGAGTAGAAGAGATCTTATGGCCTGTGCTCAGACAGGTTCTGGAAAGACTGCAGCCTTTCTTTTGCCAATTATGAACAGAGTCTTGCAAGAAGGACCATATGGACAAAATTATGGTATTGGTGGTCGACCAGGAAGAAGAAAGCAATTCCCATATTGCCTAATTCTTGCACCGACAAGAGAATTGGCATCACAAATTTTTGATGAGGCCAGGAAGTTTGCATACCGCTCAATGTTACGTCCTTGTGTTGTCTATGGTGGTGCAGATGTTGGAACACAAATGCGTGAACTGGATCGAGGCTGCCATATTCTTGTTGCTACACCTGGAAGACTTGTTGACATGATTCAGCGAGGAAAAATTGGATTGGAATCAGTGAGGTTTTTGGTTCTCGATGAAGCAGATCGTATGTTGGATATGGGATTCGAGCCTCAGATCCGTGAAATTGTTGAAAAGTGTGACATGCCTCCATCAGGACAGAGAGAAACTCACATGTTTAGTGCCACTTTCCCAAAGGAGATTCAAATGCTGGCTCGGGATTTTCTGGATAACTATATTTTCTTGGCTGTTGGCCGAGTTGGCTCTACAAGTGAGAATATCACTCAGAAAGTTGTTTGGGTAGAGGAACTTGACAAAAGATCATTCCTTCTTGATCTTCTTAATGCATCAGGTCCAGATTCTCTTACCTTGGTTTTTGTTGAAACAAAGCGTGGTGCTGATGCCCTTGAGGATTTCCTTTACCGTGAAGAGTACAATGCTGCATCAATCCATGGAGATAAGTCTCAGTATGAGAGAGAGGATGCTCTAGCATCTTTCAGAAGTGGCCGTACTCCAATCCTTGTCGCCACTGCCGTTGCTGCTAGAGGTCTTGATATTCCAAACGTAAAGCATGTAATCAACTTTGACATGCCTACTGACTTTGAGGAATACGTTCATAGAATTGGCAGAACTGGAAGAGTGGGGCATACAGGCCTTGCCACCTCATTTTTCAACGAGAAGAACCGCAATGTTGCACGTGATCTAATGGATTTGTTGATTGAGGCAAAGCAAGAAGTTCCTAACTGGCTGGACTCAATGGCTTACCAAGCCCAGCAACatcttgttgcaaagaaagcaCAGCAGAGGAACAGATATGGGGCTGGTGGTTTTGGGAGCAGAGATTATCGACAGTATCAAAACCGAGGTAATCAGAATCAAGGTGGCTTTAGAAGCAGTCACGATCACAATCAAGGTTTTGGTGGAAACCGCGGCGGCTTTGGTGGCTTCAGTGGGGGCGGCTTTAACCATTTTGGTCAGCATCACAACATGAATCGTGGGCCCCCGACCAATGCCCGCGCCCCGGTCAATGACTGGTTTGACAGTTGA

Transcript

BRAKERKYLT00000019852

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O15523	ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN=DDX3Y PE=1 SV=2
P24346	Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis OX=8355 GN=an3 PE=2 SV=1
Q6GVM6	ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes OX=9598 GN=DDX3Y PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000987 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR014014 all species →	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR000629 all species →	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47958 all species →	ATP-DEPENDENT RNA HELICASE DBP3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003724 all species →	Molecular Function	RNA helicase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007276 all species →	Biological Process	gamete generation	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000019852.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.