Gene detail

Detailed information of BRAKERKYLP00000019908.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: CAD7249170.1, unnamed protein product [Darwinula stevensoni]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000019908

ATGGAGGTACCTAGcagaaaagtcagggaagtcattgaaaaagaaactggGAAGTGTCTCTCTTCCAAAGACCTGATCAATAGAAAAGCAGAAATGGATGAAAAGCAAACTGACATTGAACAGCTGCTTAGTAGTGTGAAAGTATTAGAAAAGAATGACCCACATGCATTTGCTAGGATATGCTACAGTGAAAATCAAACTGTCCAAGTCATTTTTTTTCAGCCCAGCTCATGCACAAAACTCTTTGAAAAATATGGTAGTGTCCTGATGATTGATGGTACCTACAACTTGACAAATAGAGGGTTCATAGTGCTTACATTTGCAGTGATTGACAATTATTCCTGTACAAAACTAATAGCATGGGCAATGCTGGcaaatgaaaaagcagaaacTCTAGTTGCTGCAATGAATTTATTTAAGGAAGCCAATACTGAGGCAATAGGCAAGACTGATTATATTGTAATTGATAAAGACTACACTGAAATTCAAGCACTATTTGAAGTCTTTCCCCTTATCCACTGGATCATCTGCAGGTGGCACTGTGAACGTGCTGTTGTCAAACACATTCGTGAATTACACTTGGGGAAAAATGCACAATACCTCAAAGATAAGTTCAAGAAATTATTCACTAAAATGATTTATGAGCCAACAGAAACTGAATACTTCCGGCTTTGGGATGAATTGTGTGGAATGTCAGATGAAAAGCTGGATAAAGCTGATTCCTTAACAGTAGACAATTTCAAGCGATACatggaagaaaattggcatAATCACCGAGAGAGCCTACCTAGCAATGAAAGAAAGACTGTCAAAAGGAAAATTGATTGCTTAACAAAATCTGTTGATGCAGGTGCTACCCCTGTGATTGATGACATTGGGGAAGAAACTGTAAAGGCAGACACAAATGAAACaggaaatgaaatagaaataggGCTGTCACCTAGAAGAAAGGTTCATTTGAAAACTGGAGGCTACAATACTGGAAGCAAGAAAAGTAGGGTTCCTAttcatacacacacagacaaagaACCACTGGAAGACTATCAGGTAGAGGTTAACAAAACCATGAAACTGTTTCGGGGCCATGAATGGGATAGAACGGACTTTGCCATACTTGAATGTTCCACAGGTTTCTTAACGGATAACCACTTTGCATGGGAAGGCCTCAACACAGATAATGGTGTTTACACAGCTCAGCCTTTTCAACGCAAAGCTGAGTCACCACCACTTGTATCAGATGATGAGGACGAGCAGGATGATGATCTTGAACTTGAAGACGTCCCTTGTTTACCATGGTCTCAAACTGTAGATAGAAAGGTCTTCTTGAAACCAATGAAGAAGAAACAGATTATGCCTCCTGAACTTATTCATGAGATTTTCCCCAATTTGGAAGAATTAATCGAAGTCCATACCTCTCTTCTTGCGGAATTGAATACGAGGTGTGCGAAAGAGGGCGATGTCATAGCTTCAATTTCTGATATCATATTAGCAAGGTTTGATGGTCAGCCCGGCGAAAGAGCAAAAGAAGTTGCTGCtgtctttaatcaaaatcaaagaatggcAATGGAAATGCTCAAGCGACAAGAGGAATCAAGATATTGCGGACGATTAAAATTCAATGATATTATGGCAAATACCCATCAAAGGTTGACAAAATATCCATTGTTACTACGAGAGATGTTGAAGTCAACCCCATATAAACGAGCTTTCTTTCTGGTCAGCACATCTTCTGTAGGACCACAAATTTATGAATTAGTAACTAATACAATTACAGAGCGTACCACATGGGTCAATGTTATCACGGAGTGCGTCGAAGTTTCTTTAAGAAAAGCGAAAGAGCGAGGACGACGTGGTGCTCTGTGTCTTCCACAATCTCCAAGCGTATCGCTTTCGGAATCGATCGAAGAGTCAAAGGATGAAATCACACCAAACGAAAGCTCAAGTCGACGGGGGTCATCTGTAACCAAAGATGAAGATAACAAAGAAGTGGAGACTCTAGAgttggataaaaataaaatctttGAAGTGTATGAGACGTCTGAGATCCCAGAAGATGAAAAACGAGAGCAAACACTAGAGCTGCCTTCAAATGAGCGCATAGTGGAGTTGATGGATCAATTACGATCAAAGGATGATGAGATACGAAAGTCACTCGAAGAAAAAGGAAGAATTGTTGCTGAATTAAGGGCCCCTACGAATGAAAATCAATTGGGAGCAAGagATATAATTTTCGCTGCAATGGTTCAAGCTGATCGACTAACAAAAACAGTAAGCGAGATGTTAACGATACATCATCGTTCGGATAGTAGTGGACTTAATGACATGACAACAGCATCTCCGAGTTCATCAGTCGTTTCTAACGGACTCTCAAGGGAGGATACTCTAAATGATGACGACACTGCATTTCACCAACCAAGGgAGGTCTTAGTCGAAACAACGGCAATGATCAACGAGCATTTAACAACTCTGATGCGCTTAATAACTGAAGAAGAAAGTACAAAAGAGAGGCTTCGCAGCGACCTGCAGGAATCCCAAGCAACAATCCAACGTCTATCACAATTAACGAATTCTGATGTCGTGAGTGAAACTGGGGAATCACCCGACATCGTTCCGACTTCGAGTTTACCATCATTAGGTGGCCATAGTTCAACTTCTACTACACCAAACCCTAAACCAGACATTTTTATCGTTTCCGATGATATCTCTGAAGCAAAATTCATAATTGTCCAGAAGAAAGTTCCTGAATTCATTGTACCTGATCTTACTGGATTTCAGGAATGCTTCAATTCTCCATATGGAACCcaatattttgctgaatatgCAGAAAAAGTACCAGGTGAAACCACAGATCTACTCTCTAAGCTTGCAAAAGACcttcaaattcatttggtaGGTGGCTCAATACCTGAATCATGTGATGGTAAGCTTTACAATACGGCCACTGTTTTTGGACCAGATGGTGGAATGCTTGGCACATTTAGAAAGATGCATCTCTTTGATATTGATGTTCCTGGCAAAATAACAGTCCAAGAATCTTCTGTATTGTCACCAGGAAGTAGTCTTTTGTCATTTGAAGTTGGAAAATGCAAAGTTGGAATTGGTATTTGTTATGATATCAGATTCCCAGAGTTGGCTCATTTGTATGATCAACAAGGGTGTAGCCTCCTGTTGTATCCTGGAGCTTTTAATATGACAACTGGGCCAGCACATTGGCAGTCTCTGGTAACAGCAAGGGCTTTAGACAATCAGGTATATGTTGCTGGATGCAGCCCAGCGAGAGACGAATCTGCAACATATGTAGCCTGGGGGCACAGCGTGATTGTTGATCCTTGGGGAAAAGTGGTGGCGAAAACAGAAGAGAAAGAAGATATAATTTATGCAGATATAGATTTGGACCACATAGATGCAATACGAAGTCAGATTCCCACGCATTTCCAAAAGAGAAACGACGTTTACAAAATTGAGGACCTGAAAGTCCGTGCAAACAAAGCAGAAACTCTAGCAAGTGCCCGAGCACTTGTCACAAAGGCTGCAGAAAATGGCGCTAAACTGATTTCGCTTCCAGAATGCTTCAATTGTCCATATGGAACCCAATACTTTGCTAACTATGCTGAGGAAATACCAGGTGAAACTACAGATTTACTCTCTACACTTGCAAGAGACCTTAAAATCCATTTGGTAGGTGGCTCAGTACCTGAATCATATGATGGCAAGCTGTACAATACTGCCACTGTTTTTGGACCAGATGGTGAAATGCTCGGCAAGTTTAGAAAGGTGCACCTTGTTGATATTGATGTACCTGGTAAAGTTGCAATCCAAGAATCTTCAGTTCTGTCACCTGGAAGtgatcttttttcattttatgtagGACCATTCAAAGTTGGGATTGGTATTTGTTATGATTTAAGATTTCCAGAGTTTTCTCACTTGTATTATCAACAAGGATGTAGTCTTTTGTTATATCCTGGAGCTTTTAGCTTGATAACAGGACCAGCACATTGGCAGCCTCTTTTAACTGCAAGGGCTTTGGACCATCAGGTATATGTTGCTGGATGTGGTCCAGCGAGAGATATGGCAGCATCATATGTAACCTGGGGACATAGCATGGTTGTTGATCCATgGGGAAAAGTGGTGGCGAAGACCGATGAGAAAGAAGGCATTGTTTATGCAGACATAGATCTGGACCATGTAGAAGCTATACGGCAACAGATTCCCCTACATTTCCAGAAGAGAAACGACATGTACAAAGTTGAAAACATGCTTTCCAACTGA

Transcript

BRAKERKYLT00000019908

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q28IE5	Omega-amidase NIT2 OS=Xenopus tropicalis OX=8364 GN=nit2 PE=2 SV=1
Q497B0	Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1
Q4VBV9	Omega-amidase NIT2 OS=Danio rerio OX=7955 GN=nit2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001529 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF00795 all species →	CN_hydrolase	Carbon-nitrogen hydrolase	Family	Interproscan
PF21056 all species →	ZSWIM1-3_RNaseH-like	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain	Domain	Interproscan
PF17838 all species →	PH_16	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036526 all species →	Homologous_superfamily	Carbon-nitrogen hydrolase superfamily	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR045254 all species →	Domain	Nit1/2, carbon-nitrogen hydrolase domain	Interproscan
IPR003010 all species →	Domain	Carbon-nitrogen hydrolase	Interproscan
IPR001110 all species →	Conserved_site	Uncharacterised protein family UPF0012, conserved site	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR048324 all species →	Domain	ZSWIM1/3, RNaseH-like domain	Interproscan
IPR041020 all species →	Domain	ARHGEF1-like, PH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23088 all species →	NITRILASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0016811 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006107 all species →	Biological Process	oxaloacetate metabolic process	Interproscan
GO:0006528 all species →	Biological Process	asparagine metabolic process	Interproscan
GO:0006541 all species →	Biological Process	glutamine metabolic process	Interproscan
GO:0050152 all species →	Molecular Function	omega-amidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000019908.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.