Gene detail

Detailed information of BRAKERKYLP00000021497.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: KAJ7374531.1, Lysine--tRNA ligase [Desmophyllum pertusum]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99MN1	Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1
P37879	Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1
Q15046	Lysine--tRNA ligase OS=Homo sapiens OX=9606 GN=KARS1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003612 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00152 all species →	tRNA-synt_2	tRNA synthetases class II (D, K and N)	Domain	Interproscan
PF01336 all species →	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044136 all species →	Domain	Lysine-tRNA ligase, class II, N-terminal	Interproscan
IPR004364 all species →	Domain	Aminoacyl-tRNA synthetase, class II (D/K/N)	Interproscan
IPR018149 all species →	Domain	Lysyl-tRNA synthetase, class II, C-terminal	Interproscan
IPR045864 all species →	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR004365 all species →	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan
IPR006195 all species →	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42918 all species →	LYSYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0004824 all species →	Molecular Function	lysine-tRNA ligase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006430 all species →	Biological Process	lysyl-tRNA aminoacylation	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000021497.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.