Gene detail

Detailed information of BRAKERKYLP00000021720.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_027059594.1, nuclear cap-binding protein subunit 3-like isoform X1 [Pocillopora damicornis]
Species abbreviation MPAPU · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006250 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10309 all species →	NCBP3	Nuclear cap-binding protein subunit 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019416 all species →	Family	Nuclear cap-binding protein subunit 3	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16291 all species →	NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000340 all species →	Molecular Function	RNA 7-methylguanosine cap binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0000339 all species →	Molecular Function	RNA cap binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000021720.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.