Gene detail

Detailed information of BRAKERKYLP00000022006.1 in Mastigias papua

Genomic Location: chr6:1330097...1332655
NR annotation: XP_012558378.1, probable sodium/metabolite cotransporter BASS4, chloroplastic [Hydra vulgaris]
Species Mastigias papua · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F4IZC4	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1
B8AJ09	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1
Q6ESG1	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001732 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13593 all species →	SBF_like	SBF-like CPA transporter family (DUF4137)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038770 all species →	Homologous_superfamily	Sodium/solute symporter superfamily	Interproscan
IPR016833 all species →	Family	Putative sodium bile acid cotransporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18640 all species →	SOLUTE CARRIER FAMILY 10 MEMBER 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009941 all species →	Cellular Component	chloroplast envelope	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14347	SLC10A7, P7; solute carrier family 10 (sodium/bile acid cotransporter), member 7	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.