Gene detail

Detailed information of BRAKERKYLP00000023988.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: XP_050710731.1, uncharacterized protein LOC126995286 [Eriocheir sinensis]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

BRAKERKYLT00000023988

ATGAGAGATGCCAAGATAGTCACCCTGTATAAGAACAAGGGTGAGAGGAGTGACTGTAACAATTACAGAGGCATCTCCCTTCTGAGCACTGTTGGCAAAGTGTACGCCCGAGTCATGTTAGCACGCCTGCGACAGCTGGGACAGGATGTTTACCCAGAGCCTCAATGTGGCTTTCGTGCAGAGTGCTCTACAGTGGATATGATCTTCTCTCTTCGACAGCTGCAGGAAAAGTGCAGAGAGCAACAGATGCCCCTGTACATTGCCTTCATTGATCTAACAAAAGTGTTTTATTTGGTCAGCAGAGAAGGGCTCTTCAGTCTTCTGGTGAAAATTGGCTGCCTCCCAAAGCTACACAGTATGATCAGGTCATTTCATGACAGCATGAAGGCAACGGTGCAGTATGCAGGCAACATGTCTGAGTCCTTTGATATCAAGAGTGGGGTGAAACAAGGCTGCGTTTTGCCGCCCACCATCTTTGGGATCTTTTTCTCCATGCTCCTGAAGCATGCACTTGGGACTGCCACAGAAGGCCTGTACCTGTACACCAGATCAGATCGGAGAATGTTCAACCTTGCAAGGCTGAGAGCAAAGACTAAAATTCGTGAGGTTACTGTTAGAGACCTGCTCTTTGCTCATGACGCTGCCGTCACCACTCACACAATTCAAGAGCTTCAAATACTCATGGACAGGTTCTCCCAAGCCTGCAAAGACTTCGGGCTCACAATCAGCCTGAAGAAGACTAGCGTGCTGGCCCAGGGTGTGGAAACACCACCTGTCACCACCATTGACAACTACGAACTAGGAGTTGTACACCAATTCACGTACCTTGGATCCACAATTACCGACAATCTGTCCCTTGATGCGAAAGTCAACTGGCTCATCGGGAAGGCTGCAACAACACTTGGTCAGCTCACCACACGTGTCTGGGAGAACCCCAAGCTGTCAACCACGACCAAGATGGCAGTGTACAATTCCTGCATCATCAACACTCTTCTGTATGGCAGTGAAGCATGGACAACATATGCAAAACAGGAGCAGAGACTGAACAGTCTCCACATGCGCTACCTCCGCCGCATCCTCAACATCAAATGGAGCAACAAAGTGCCAAACACAGAGGTCCTCGCACGTGCTGGCCTCCCCTCGATGTACACGCTGCTCAGACAGCGAAGGTTGCGCTGGCTCGGCCATGTTAACCGGATGGAGGGCGGCCGAATCCCAAAAGACGTCTTGTATGGTGAGCTAGTGTCTGGCACAAGACTTGTTGGCTGGCCCAAGCTGTGCTACAAGGATATCTGTAAGCGCGACATGAAAGCTCTGGACATCAACACTGAGATCTGGGAGTCCATGTTAGCTGACCACAGCAGATGGCGTGGCATGCTCAAGAAACAGTTGAAGATGGGAGAGGAGAAGATCCTGAACCAGGCAGAGGACAAGAGAGCCAGACGGAAGGCATGCATCTCAGGAGACAACTCGGTGACCGCTCACATCTGCACACACTGTGGCAGAGTCTGCCGCTCCCTGACAACATATACAGACAAAGGAAAAAAGCCTGAAGTTGGcagattcattcattttgatcaTATAAAATTTTGGGTTGGAAATGCAAAAcagGCAGCATCTTTCTACTGTACAAGAATGGGATTTGAACCTTATGCATACAAGGGCCTAGAGACTGGTTCCAGACAAGTTTGCAGTCATGCTGTAAGACAGAACAGGATCGTTTTTGTGTTTGAATCTGCATATGAGCCAGGCAACAAGATTACAGAAGACATGGGAAGGCACATCACAAAACATGGCGATGGAGTCAAGGATATAGCTTTTGAAGTTGAGGACTGTATCAATATCTATAAGAAAGCCATTGAGCGTGGTGGTGTTAGTGTAAGAGAACCATGGGACGAGACAGATGAAAACGGAACTGTTACTTTTGCCACAGTTAAAACGTATGGTGATACGACACACACATTTGTTGAAAGAAAGGGATACAAAGGCCTCTTTTTACCAGGATTCAAAGAGCCTATTGAGCGAGATTGTCTCTCTTCAACTTTGCGACCTGGTATGCTTAATTTTATTGATCACGTGGTGGGGAATCAACCACTTGATGACATGACTCCAGTTGCTGAATGGTATGAAAAAGTGCTACAATTCCATAGATTTTGGTCAGTTGATGATTCGCAGATTCATACCGAATACAGTGCACTGCGGTCGATAGTTGTGACCAATTGGGAGGAGACCATCAAGATGCCTATTAATGAACCTGCTCCCGGAAAAAGAAAGAGTCAGATCCAGGAATATGTGGACTATTATGGCCAGGGTGGTGTACAGCATATTGCTTTGAACACAGATGATATCATTGGCACGATTCGCAACCTGAAGTCCCGTGGAATGAATTTCCTAACCATTCCTGACACGTATTATGAAAACTTGAGAGAACGGCTGAAACATTCCAAAGTGACCGTGAATGAAGATATGGACACGTTGCAAGAGCTTAAAATCCTTGTTGATTATGACGACGCTGGATATCTGCTGCAGATTTTCACAAAACCATGCCAAGATAGACCAACTCTCTTCCTGGAAGTTATCCAAAGGCATAACCATCAGGGCTTTGGAGCTGGAAATTTCAAGGCACTCTTCGAGGCAATAGAGCTGGATCAGGACAAACGAGGCAACCTTGTATTGTGA

Transcript

BRAKERKYLT00000023988

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6TGZ5	4-hydroxyphenylpyruvate dioxygenase OS=Danio rerio OX=7955 GN=hpd PE=2 SV=1
Q5BKL0	4-hydroxyphenylpyruvate dioxygenase OS=Xenopus tropicalis OX=8364 GN=hpd PE=2 SV=1
Q5EA20	4-hydroxyphenylpyruvate dioxygenase OS=Bos taurus OX=9913 GN=HPD PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004616 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00903 all species →	Glyoxalase	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR005956 all species →	Family	4-hydroxyphenylpyruvate dioxygenase	Interproscan
IPR029068 all species →	Homologous_superfamily	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Interproscan
IPR041736 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, N-terminal	Interproscan
IPR037523 all species →	Domain	Vicinal oxygen chelate (VOC) domain	Interproscan
IPR004360 all species →	Domain	Glyoxalase/fosfomycin resistance/dioxygenase domain	Interproscan
IPR041735 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11959 all species →	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003868 all species →	Molecular Function	4-hydroxyphenylpyruvate dioxygenase activity	Interproscan
GO:0009072 all species →	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016701 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006572 all species →	Biological Process	tyrosine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERKYLP00000023988.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.