Gene detail

Detailed information of BRAKERKYLP00000024475.1 in Mastigias papua

Genomic Location: not available for this species
NR annotation: EDO41604.1, predicted protein [Nematostella vectensis]
Species Mastigias papua · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7HN62	Ribosome-recycling factor OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=frr PE=3 SV=1
B9K8T5	Ribosome-recycling factor OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=frr PE=3 SV=1
A8F863	Ribosome-recycling factor OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=frr PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006473 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01765 all species →	RRF	Ribosome recycling factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036191 all species →	Homologous_superfamily	RRF superfamily	Interproscan
IPR002661 all species →	Family	Ribosome recycling factor	Interproscan
IPR023584 all species →	Domain	Ribosome recycling factor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20982 all species →	RIBOSOME RECYCLING FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0043023 all species →	Molecular Function	ribosomal large subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02838	frr, MRRF, RRF; ribosome recycling factor	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.